RNA–Protein interactions for RNA: ENST00000518325.1

PCDHGA7-201, Transcript of protocadherin gamma subfamily A, 7, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA7, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7-201ENST00000518325 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
PCDHGA7-201ENST00000518325 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PCDHGA7-201ENST00000518325 MT1LQ93083 61 aa3.97□□□□□ -1.77
PCDHGA7-201ENST00000518325 MT1EP04732 61 aa3.97□□□□□ -1.77
PCDHGA7-201ENST00000518325 USH2AO75445 5202 aa3.94□□□□□ -1.78
PCDHGA7-201ENST00000518325 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
PCDHGA7-201ENST00000518325 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
PCDHGA7-201ENST00000518325 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
PCDHGA7-201ENST00000518325 MT1MQ8N339 61 aa3.86□□□□□ -1.79
PCDHGA7-201ENST00000518325 MT4P47944 62 aa3.84□□□□□ -1.79
PCDHGA7-201ENST00000518325 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
PCDHGA7-201ENST00000518325 KMT2DO14686 5537 aa3.84□□□□□ -1.79
PCDHGA7-201ENST00000518325 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
PCDHGA7-201ENST00000518325 MT3P25713 68 aa3.77□□□□□ -1.81
PCDHGA7-201ENST00000518325 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
PCDHGA7-201ENST00000518325 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
PCDHGA7-201ENST00000518325 PRM1P04553 51 aa3.69□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
PCDHGA7-201ENST00000518325 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
PCDHGA7-201ENST00000518325 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
PCDHGA7-201ENST00000518325 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
PCDHGA7-201ENST00000518325 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
PCDHGA7-201ENST00000518325 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
PCDHGA7-201ENST00000518325 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
PCDHGA7-201ENST00000518325 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
PCDHGA7-201ENST00000518325 MT1AP04731 61 aa3.56□□□□□ -1.84
PCDHGA7-201ENST00000518325 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
PCDHGA7-201ENST00000518325 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
PCDHGA7-201ENST00000518325 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
PCDHGA7-201ENST00000518325 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
PCDHGA7-201ENST00000518325 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
PCDHGA7-201ENST00000518325 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
PCDHGA7-201ENST00000518325 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
PCDHGA7-201ENST00000518325 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
PCDHGA7-201ENST00000518325 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
PCDHGA7-201ENST00000518325 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
PCDHGA7-201ENST00000518325 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
PCDHGA7-201ENST00000518325 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
PCDHGA7-201ENST00000518325 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
PCDHGA7-201ENST00000518325 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
PCDHGA7-201ENST00000518325 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
PCDHGA7-201ENST00000518325 NEBP20929 6669 aa3.17□□□□□ -1.9
PCDHGA7-201ENST00000518325 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
PCDHGA7-201ENST00000518325 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PCDHGA7-201ENST00000518325 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
PCDHGA7-201ENST00000518325 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
PCDHGA7-201ENST00000518325 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PCDHGA7-201ENST00000518325 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
PCDHGA7-201ENST00000518325 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
PCDHGA7-201ENST00000518325 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PCDHGA7-201ENST00000518325 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
PCDHGA7-201ENST00000518325 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
PCDHGA7-201ENST00000518325 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
PCDHGA7-201ENST00000518325 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2.01
PCDHGA7-201ENST00000518325 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2.01
PCDHGA7-201ENST00000518325 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
PCDHGA7-201ENST00000518325 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
PCDHGA7-201ENST00000518325 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
PCDHGA7-201ENST00000518325 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
PCDHGA7-201ENST00000518325 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
PCDHGA7-201ENST00000518325 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
PCDHGA7-201ENST00000518325 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PCDHGA7-201ENST00000518325 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
PCDHGA7-201ENST00000518325 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
PCDHGA7-201ENST00000518325 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
PCDHGA7-201ENST00000518325 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
PCDHGA7-201ENST00000518325 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PCDHGA7-201ENST00000518325 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PCDHGA7-201ENST00000518325 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
PCDHGA7-201ENST00000518325 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
PCDHGA7-201ENST00000518325 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
PCDHGA7-201ENST00000518325 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
PCDHGA7-201ENST00000518325 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 103.6 ms