RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
CPEB4-203ENST00000517880 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
CPEB4-203ENST00000517880 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
CPEB4-203ENST00000517880 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
CPEB4-203ENST00000517880 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
CPEB4-203ENST00000517880 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CPEB4-203ENST00000517880 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
CPEB4-203ENST00000517880 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
CPEB4-203ENST00000517880 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CPEB4-203ENST00000517880 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
CPEB4-203ENST00000517880 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
CPEB4-203ENST00000517880 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
CPEB4-203ENST00000517880 USH2AO75445 5202 aa4.01□□□□□ -1.77
CPEB4-203ENST00000517880 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
CPEB4-203ENST00000517880 NDUFAF8A1L188 74 aa4□□□□□ -1.77
CPEB4-203ENST00000517880 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
CPEB4-203ENST00000517880 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
CPEB4-203ENST00000517880 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
CPEB4-203ENST00000517880 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
CPEB4-203ENST00000517880 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
CPEB4-203ENST00000517880 MT1EP04732 61 aa3.84□□□□□ -1.79
CPEB4-203ENST00000517880 MT1LQ93083 61 aa3.79□□□□□ -1.8
CPEB4-203ENST00000517880 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
CPEB4-203ENST00000517880 MT1GP13640 62 aa3.7□□□□□ -1.82
CPEB4-203ENST00000517880 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
CPEB4-203ENST00000517880 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CPEB4-203ENST00000517880 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
CPEB4-203ENST00000517880 KMT2DO14686 5537 aa3.68□□□□□ -1.82
CPEB4-203ENST00000517880 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CPEB4-203ENST00000517880 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
CPEB4-203ENST00000517880 MT1MQ8N339 61 aa3.61□□□□□ -1.83
CPEB4-203ENST00000517880 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
CPEB4-203ENST00000517880 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
CPEB4-203ENST00000517880 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
CPEB4-203ENST00000517880 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
CPEB4-203ENST00000517880 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
CPEB4-203ENST00000517880 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
CPEB4-203ENST00000517880 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
CPEB4-203ENST00000517880 SPRR2EP22531 72 aa3.43□□□□□ -1.86
CPEB4-203ENST00000517880 SPRR2BP35325 72 aa3.43□□□□□ -1.86
CPEB4-203ENST00000517880 SPRR2AP35326 72 aa3.43□□□□□ -1.86
CPEB4-203ENST00000517880 INE1O15225 51 aa3.4□□□□□ -1.87
CPEB4-203ENST00000517880 NEBP20929 6669 aa3.38□□□□□ -1.87
CPEB4-203ENST00000517880 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
CPEB4-203ENST00000517880 SPRR2DP22532 72 aa3.3□□□□□ -1.88
CPEB4-203ENST00000517880 MT1AP04731 61 aa3.25□□□□□ -1.89
CPEB4-203ENST00000517880 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
CPEB4-203ENST00000517880 MT3P25713 68 aa3.23□□□□□ -1.89
CPEB4-203ENST00000517880 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
CPEB4-203ENST00000517880 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
CPEB4-203ENST00000517880 MDN1Q9NU22 5596 aa3.15□□□□□ -1.91
CPEB4-203ENST00000517880 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
CPEB4-203ENST00000517880 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
CPEB4-203ENST00000517880 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
CPEB4-203ENST00000517880 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
CPEB4-203ENST00000517880 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CPEB4-203ENST00000517880 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CPEB4-203ENST00000517880 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CPEB4-203ENST00000517880 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
CPEB4-203ENST00000517880 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
CPEB4-203ENST00000517880 MT4P47944 62 aa2.83□□□□□ -1.96
CPEB4-203ENST00000517880 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
CPEB4-203ENST00000517880 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CPEB4-203ENST00000517880 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CPEB4-203ENST00000517880 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
CPEB4-203ENST00000517880 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
CPEB4-203ENST00000517880 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
CPEB4-203ENST00000517880 PRM1P04553 51 aa2.55□□□□□ -2
CPEB4-203ENST00000517880 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
CPEB4-203ENST00000517880 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
CPEB4-203ENST00000517880 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CPEB4-203ENST00000517880 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
CPEB4-203ENST00000517880 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CPEB4-203ENST00000517880 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CPEB4-203ENST00000517880 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
CPEB4-203ENST00000517880 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CPEB4-203ENST00000517880 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 89.8 ms