RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SPRR2FQ96RM1 72 aa9□□□□□ -0.97
COL13A1-210ENST00000517713 MT1GP13640 62 aa8.97□□□□□ -0.97
COL13A1-210ENST00000517713 MACF1Q9UPN3 7388 aaKnown RBP8.96□□□□□ -0.98
COL13A1-210ENST00000517713 MUC12Q9UKN1 5478 aa8.93□□□□□ -0.98
COL13A1-210ENST00000517713 MT1MQ8N339 61 aa8.91□□□□□ -0.98
COL13A1-210ENST00000517713 A0A0A0MQY5 61 aa8.9□□□□□ -0.99
COL13A1-210ENST00000517713 KRTAP4-3Q9BYR4 195 aa8.83□□□□□ -1
COL13A1-210ENST00000517713 LCE5AQ5TCM9 118 aa8.81□□□□□ -1
COL13A1-210ENST00000517713 KRTAP5-9P26371 169 aa8.7□□□□□ -1.02
COL13A1-210ENST00000517713 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
COL13A1-210ENST00000517713 SYNE2Q8WXH0 6885 aaKnown RBP8.65□□□□□ -1.02
COL13A1-210ENST00000517713 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
COL13A1-210ENST00000517713 KRTAP2-3P0C7H8 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 KRTAP2-4Q9BYR9 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 LCE1AQ5T7P2 110 aa8.53□□□□□ -1.04
COL13A1-210ENST00000517713 SPRR2EP22531 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 SPRR2BP35325 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 SPRR2AP35326 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 MDN1Q9NU22 5596 aa8.4□□□□□ -1.06
COL13A1-210ENST00000517713 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
COL13A1-210ENST00000517713 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
COL13A1-210ENST00000517713 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
COL13A1-210ENST00000517713 INE1O15225 51 aa8.23□□□□□ -1.09
COL13A1-210ENST00000517713 SPRR2DP22532 72 aa8.09□□□□□ -1.11
COL13A1-210ENST00000517713 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
COL13A1-210ENST00000517713 MT1AP04731 61 aa7.93□□□□□ -1.14
COL13A1-210ENST00000517713 KRTAP9-7A8MTY7 169 aa7.91□□□□□ -1.14
COL13A1-210ENST00000517713 KRTAP6-1Q3LI64 71 aa7.91□□□□□ -1.14
COL13A1-210ENST00000517713 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
COL13A1-210ENST00000517713 NEBP20929 6669 aa7.63□□□□□ -1.19
COL13A1-210ENST00000517713 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.2
COL13A1-210ENST00000517713 SYNE1Q8NF91 8797 aaKnown RBP7.51□□□□□ -1.21
COL13A1-210ENST00000517713 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
COL13A1-210ENST00000517713 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
COL13A1-210ENST00000517713 KRTAP12-4P60329 112 aa7.37□□□□□ -1.23
COL13A1-210ENST00000517713 LCE3DQ9BYE3 92 aa7.23□□□□□ -1.25
COL13A1-210ENST00000517713 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
COL13A1-210ENST00000517713 MT3P25713 68 aa7.17□□□□□ -1.26
COL13A1-210ENST00000517713 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
COL13A1-210ENST00000517713 LCE3EQ5T5B0 92 aa7.08□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
COL13A1-210ENST00000517713 MT4P47944 62 aa7.05□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
COL13A1-210ENST00000517713 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
COL13A1-210ENST00000517713 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
COL13A1-210ENST00000517713 KRTAP5-2Q701N4 177 aa6.77□□□□□ -1.33
COL13A1-210ENST00000517713 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
COL13A1-210ENST00000517713 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
COL13A1-210ENST00000517713 OBSCNQ5VST9 7968 aa6.52□□□□□ -1.37
COL13A1-210ENST00000517713 PRM1P04553 51 aa6.42□□□□□ -1.38
COL13A1-210ENST00000517713 LCE1EQ5T753 118 aa6.08□□□□□ -1.44
COL13A1-210ENST00000517713 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
COL13A1-210ENST00000517713 LCE1BQ5T7P3 118 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 KRTAP5-1Q6L8H4 278 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
COL13A1-210ENST00000517713 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
COL13A1-210ENST00000517713 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
COL13A1-210ENST00000517713 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
COL13A1-210ENST00000517713 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
COL13A1-210ENST00000517713 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
COL13A1-210ENST00000517713 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
COL13A1-210ENST00000517713 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
COL13A1-210ENST00000517713 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
COL13A1-210ENST00000517713 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
COL13A1-210ENST00000517713 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
COL13A1-210ENST00000517713 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
COL13A1-210ENST00000517713 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
COL13A1-210ENST00000517713 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
COL13A1-210ENST00000517713 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
COL13A1-210ENST00000517713 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
COL13A1-210ENST00000517713 PHGR1C9JFL3 82 aa4.28□□□□□ -1.73
COL13A1-210ENST00000517713 KRTAP21-1Q3LI58 79 aa3.97□□□□□ -1.77
COL13A1-210ENST00000517713 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
COL13A1-210ENST00000517713 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms