RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
SKP1-204ENST00000517691 COA5Q86WW8 74 aa1.32□□□□□ -2.2
SKP1-204ENST00000517691 LINC01558Q9Y6Z2 57 aa1.31□□□□□ -2.2
SKP1-204ENST00000517691 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
SKP1-204ENST00000517691 KRTAP10-10P60014 251 aa1.3□□□□□ -2.2
SKP1-204ENST00000517691 S4R3F8 94 aa1.3□□□□□ -2.2
SKP1-204ENST00000517691 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
SKP1-204ENST00000517691 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
SKP1-204ENST00000517691 INE1O15225 51 aa1.28□□□□□ -2.2
SKP1-204ENST00000517691 MT2AP02795 61 aa1.28□□□□□ -2.2
SKP1-204ENST00000517691 UQCR11O14957 56 aa1.28□□□□□ -2.2
SKP1-204ENST00000517691 MT1FP04733 61 aa1.28□□□□□ -2.2
SKP1-204ENST00000517691 ACYP2P14621 99 aa1.25□□□□□ -2.21
SKP1-204ENST00000517691 USH2AO75445 5202 aa1.24□□□□□ -2.21
SKP1-204ENST00000517691 KRTAP12-2P59991 146 aa1.23□□□□□ -2.21
SKP1-204ENST00000517691 SPATA8Q6RVD6 105 aa1.22□□□□□ -2.21
SKP1-204ENST00000517691 H0YAA0 97 aa1.22□□□□□ -2.21
SKP1-204ENST00000517691 CRIPTQ9P021 101 aa1.21□□□□□ -2.22
SKP1-204ENST00000517691 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
SKP1-204ENST00000517691 KRTAP13-4Q3LI77 160 aa1.2□□□□□ -2.22
SKP1-204ENST00000517691 SPRR2GQ9BYE4 73 aa1.2□□□□□ -2.22
SKP1-204ENST00000517691 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
SKP1-204ENST00000517691 M0QZ58 72 aa1.19□□□□□ -2.22
SKP1-204ENST00000517691 PP632Q6XCG6 107 aa1.19□□□□□ -2.22
SKP1-204ENST00000517691 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
SKP1-204ENST00000517691 A0A1B0GU69 56 aa1.18□□□□□ -2.22
SKP1-204ENST00000517691 KRTAP19-8Q3LI54 63 aa1.18□□□□□ -2.22
SKP1-204ENST00000517691 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
SKP1-204ENST00000517691 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
SKP1-204ENST00000517691 SPRR5A0A1B0GTR4 108 aa1.17□□□□□ -2.22
SKP1-204ENST00000517691 MT1BP07438 61 aa1.17□□□□□ -2.22
SKP1-204ENST00000517691 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
SKP1-204ENST00000517691 NEBP20929 6669 aa1.14□□□□□ -2.23
SKP1-204ENST00000517691 A0A0D9SG42 100 aa1.14□□□□□ -2.23
SKP1-204ENST00000517691 KRTAP12-1P59990 96 aa1.13□□□□□ -2.23
SKP1-204ENST00000517691 MT1XP80297 61 aa1.12□□□□□ -2.23
SKP1-204ENST00000517691 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
SKP1-204ENST00000517691 LCE3DQ9BYE3 92 aa1.11□□□□□ -2.23
SKP1-204ENST00000517691 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
SKP1-204ENST00000517691 KRTAP6-3Q3LI67 103 aa1.09□□□□□ -2.24
SKP1-204ENST00000517691 KMT2DO14686 5537 aa1.08□□□□□ -2.24
SKP1-204ENST00000517691 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
SKP1-204ENST00000517691 MDN1Q9NU22 5596 aa1.07□□□□□ -2.24
SKP1-204ENST00000517691 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
SKP1-204ENST00000517691 SPRR2FQ96RM1 72 aa1.06□□□□□ -2.24
SKP1-204ENST00000517691 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
SKP1-204ENST00000517691 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
SKP1-204ENST00000517691 TNP1P09430 55 aa1.03□□□□□ -2.24
SKP1-204ENST00000517691 SPRR2EP22531 72 aa1.03□□□□□ -2.24
SKP1-204ENST00000517691 SPRR2BP35325 72 aa1.03□□□□□ -2.24
SKP1-204ENST00000517691 SPRR2AP35326 72 aa1.03□□□□□ -2.24
SKP1-204ENST00000517691 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
SKP1-204ENST00000517691 KRTAP12-4P60329 112 aa1.01□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
SKP1-204ENST00000517691 SPRR2DP22532 72 aa1□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
SKP1-204ENST00000517691 MT1EP04732 61 aa0.99□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
SKP1-204ENST00000517691 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
SKP1-204ENST00000517691 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
SKP1-204ENST00000517691 MT1GP13640 62 aa0.96□□□□□ -2.26
SKP1-204ENST00000517691 MT1LQ93083 61 aa0.96□□□□□ -2.26
SKP1-204ENST00000517691 KRTAP2-1Q9BYU5 128 aa0.96□□□□□ -2.26
SKP1-204ENST00000517691 MT1MQ8N339 61 aa0.94□□□□□ -2.26
SKP1-204ENST00000517691 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
SKP1-204ENST00000517691 MT4P47944 62 aa0.88□□□□□ -2.27
SKP1-204ENST00000517691 KRTAP20-2Q3LI61 65 aa0.81□□□□□ -2.28
SKP1-204ENST00000517691 MT1AP04731 61 aa0.81□□□□□ -2.28
SKP1-204ENST00000517691 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
SKP1-204ENST00000517691 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
SKP1-204ENST00000517691 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
SKP1-204ENST00000517691 KRTAP6-2Q3LI66 62 aa0.77□□□□□ -2.29
SKP1-204ENST00000517691 PRM1P04553 51 aa0.6□□□□□ -2.31
SKP1-204ENST00000517691 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
SKP1-204ENST00000517691 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SKP1-204ENST00000517691 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms