RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.76
PCDHGA6-201ENST00000517434 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
PCDHGA6-201ENST00000517434 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
PCDHGA6-201ENST00000517434 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
PCDHGA6-201ENST00000517434 MT1LQ93083 61 aa4.02□□□□□ -1.77
PCDHGA6-201ENST00000517434 MT1EP04732 61 aa3.99□□□□□ -1.77
PCDHGA6-201ENST00000517434 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
PCDHGA6-201ENST00000517434 USH2AO75445 5202 aa3.96□□□□□ -1.78
PCDHGA6-201ENST00000517434 MT1MQ8N339 61 aa3.88□□□□□ -1.79
PCDHGA6-201ENST00000517434 MT3P25713 68 aa3.87□□□□□ -1.79
PCDHGA6-201ENST00000517434 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PCDHGA6-201ENST00000517434 PRM1P04553 51 aa3.85□□□□□ -1.79
PCDHGA6-201ENST00000517434 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PCDHGA6-201ENST00000517434 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
PCDHGA6-201ENST00000517434 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
PCDHGA6-201ENST00000517434 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
PCDHGA6-201ENST00000517434 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
PCDHGA6-201ENST00000517434 MT4P47944 62 aa3.78□□□□□ -1.8
PCDHGA6-201ENST00000517434 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
PCDHGA6-201ENST00000517434 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
PCDHGA6-201ENST00000517434 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.81
PCDHGA6-201ENST00000517434 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
PCDHGA6-201ENST00000517434 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
PCDHGA6-201ENST00000517434 MT1AP04731 61 aa3.65□□□□□ -1.82
PCDHGA6-201ENST00000517434 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
PCDHGA6-201ENST00000517434 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
PCDHGA6-201ENST00000517434 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
PCDHGA6-201ENST00000517434 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
PCDHGA6-201ENST00000517434 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
PCDHGA6-201ENST00000517434 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
PCDHGA6-201ENST00000517434 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
PCDHGA6-201ENST00000517434 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
PCDHGA6-201ENST00000517434 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
PCDHGA6-201ENST00000517434 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
PCDHGA6-201ENST00000517434 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
PCDHGA6-201ENST00000517434 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
PCDHGA6-201ENST00000517434 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
PCDHGA6-201ENST00000517434 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
PCDHGA6-201ENST00000517434 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
PCDHGA6-201ENST00000517434 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
PCDHGA6-201ENST00000517434 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.88
PCDHGA6-201ENST00000517434 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
PCDHGA6-201ENST00000517434 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
PCDHGA6-201ENST00000517434 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
PCDHGA6-201ENST00000517434 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
PCDHGA6-201ENST00000517434 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
PCDHGA6-201ENST00000517434 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
PCDHGA6-201ENST00000517434 NEBP20929 6669 aa3.09□□□□□ -1.92
PCDHGA6-201ENST00000517434 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
PCDHGA6-201ENST00000517434 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
PCDHGA6-201ENST00000517434 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
PCDHGA6-201ENST00000517434 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
PCDHGA6-201ENST00000517434 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
PCDHGA6-201ENST00000517434 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
PCDHGA6-201ENST00000517434 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
PCDHGA6-201ENST00000517434 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PCDHGA6-201ENST00000517434 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
PCDHGA6-201ENST00000517434 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
PCDHGA6-201ENST00000517434 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
PCDHGA6-201ENST00000517434 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
PCDHGA6-201ENST00000517434 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
PCDHGA6-201ENST00000517434 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
PCDHGA6-201ENST00000517434 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
PCDHGA6-201ENST00000517434 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PCDHGA6-201ENST00000517434 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PCDHGA6-201ENST00000517434 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PCDHGA6-201ENST00000517434 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
PCDHGA6-201ENST00000517434 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
PCDHGA6-201ENST00000517434 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
PCDHGA6-201ENST00000517434 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
PCDHGA6-201ENST00000517434 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
PCDHGA6-201ENST00000517434 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
PCDHGA6-201ENST00000517434 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
PCDHGA6-201ENST00000517434 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
PCDHGA6-201ENST00000517434 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
PCDHGA6-201ENST00000517434 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PCDHGA6-201ENST00000517434 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 57.6 ms