RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 FSIP2Q5CZC0 6907 aa1.1□□□□□ -2.23
SCARNA20.6-201ENST00000517251 KRTAP19-4Q3LI73 84 aa1.09□□□□□ -2.23
SCARNA20.6-201ENST00000517251 MT1MQ8N339 61 aa1.09□□□□□ -2.23
SCARNA20.6-201ENST00000517251 MACF1Q9UPN3 7388 aaKnown RBP1.09□□□□□ -2.24
SCARNA20.6-201ENST00000517251 KRTAP4-3Q9BYR4 195 aa1.08□□□□□ -2.24
SCARNA20.6-201ENST00000517251 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
SCARNA20.6-201ENST00000517251 LOC100996750A0A140TA64 210 aa1.06□□□□□ -2.24
SCARNA20.6-201ENST00000517251 INE1O15225 51 aa1.06□□□□□ -2.24
SCARNA20.6-201ENST00000517251 LCE5AQ5TCM9 118 aa1.06□□□□□ -2.24
SCARNA20.6-201ENST00000517251 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
SCARNA20.6-201ENST00000517251 MT1GP13640 62 aa1.03□□□□□ -2.24
SCARNA20.6-201ENST00000517251 KRTAP5-9P26371 169 aa1.03□□□□□ -2.24
SCARNA20.6-201ENST00000517251 SYNE2Q8WXH0 6885 aaKnown RBP1.03□□□□□ -2.24
SCARNA20.6-201ENST00000517251 KRTAP5-5Q701N2 237 aaPredicted RBP1.02□□□□□ -2.25
SCARNA20.6-201ENST00000517251 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
SCARNA20.6-201ENST00000517251 LCE1AQ5T7P2 110 aa0.99□□□□□ -2.25
SCARNA20.6-201ENST00000517251 KRTAP9-2Q9BYQ4 174 aa0.99□□□□□ -2.25
SCARNA20.6-201ENST00000517251 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
SCARNA20.6-201ENST00000517251 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
SCARNA20.6-201ENST00000517251 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
SCARNA20.6-201ENST00000517251 MT1AP04731 61 aa0.97□□□□□ -2.25
SCARNA20.6-201ENST00000517251 KRTAP4-6Q9BYQ5 205 aa0.97□□□□□ -2.25
SCARNA20.6-201ENST00000517251 NEBP20929 6669 aa0.95□□□□□ -2.26
SCARNA20.6-201ENST00000517251 LCE3BQ5TA77 95 aa0.95□□□□□ -2.26
SCARNA20.6-201ENST00000517251 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
SCARNA20.6-201ENST00000517251 KRTAP4-9Q9BYQ8 210 aa0.94□□□□□ -2.26
SCARNA20.6-201ENST00000517251 SPRR2EP22531 72 aa0.93□□□□□ -2.26
SCARNA20.6-201ENST00000517251 SPRR2BP35325 72 aa0.93□□□□□ -2.26
SCARNA20.6-201ENST00000517251 SPRR2AP35326 72 aa0.93□□□□□ -2.26
SCARNA20.6-201ENST00000517251 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.91□□□□□ -2.26
SCARNA20.6-201ENST00000517251 KRTAP6-3Q3LI67 103 aa0.9□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP5-4Q6L8H1 288 aa0.9□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP12-4P60329 112 aa0.89□□□□□ -2.27
SCARNA20.6-201ENST00000517251 SPRR2DP22532 72 aa0.88□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP9-4Q9BYQ2 154 aa0.88□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP9-7A8MTY7 169 aa0.87□□□□□ -2.27
SCARNA20.6-201ENST00000517251 HMCN1Q96RW7 5635 aa0.86□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
SCARNA20.6-201ENST00000517251 LCE3DQ9BYE3 92 aa0.86□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP9-6A0A140TA67 174 aa0.85□□□□□ -2.27
SCARNA20.6-201ENST00000517251 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
SCARNA20.6-201ENST00000517251 LCE3EQ5T5B0 92 aa0.85□□□□□ -2.27
SCARNA20.6-201ENST00000517251 OBSCNQ5VST9 7968 aa0.85□□□□□ -2.27
SCARNA20.6-201ENST00000517251 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
SCARNA20.6-201ENST00000517251 PRM1P04553 51 aa0.82□□□□□ -2.28
SCARNA20.6-201ENST00000517251 KRTAP9-9Q9BYP9 154 aa0.82□□□□□ -2.28
SCARNA20.6-201ENST00000517251 MT3P25713 68 aa0.81□□□□□ -2.28
SCARNA20.6-201ENST00000517251 KRTAP20-2Q3LI61 65 aa0.81□□□□□ -2.28
SCARNA20.6-201ENST00000517251 KRTAP5-3Q6L8H2 238 aa0.8□□□□□ -2.28
SCARNA20.6-201ENST00000517251 KRTAP4-12Q9BQ66 201 aa0.8□□□□□ -2.28
SCARNA20.6-201ENST00000517251 LCE4AQ5TA78 99 aa0.79□□□□□ -2.28
SCARNA20.6-201ENST00000517251 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
SCARNA20.6-201ENST00000517251 LCE1DQ5T752 114 aa0.77□□□□□ -2.29
SCARNA20.6-201ENST00000517251 KRTAP4-2Q9BYR5 136 aa0.76□□□□□ -2.29
SCARNA20.6-201ENST00000517251 MT4P47944 62 aa0.75□□□□□ -2.29
SCARNA20.6-201ENST00000517251 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
SCARNA20.6-201ENST00000517251 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
SCARNA20.6-201ENST00000517251 KRTAP5-1Q6L8H4 278 aa0.73□□□□□ -2.29
SCARNA20.6-201ENST00000517251 GPR98Q8WXG9 6306 aa0.72□□□□□ -2.29
SCARNA20.6-201ENST00000517251 KRTAP2-2Q9BYT5 123 aa0.72□□□□□ -2.29
SCARNA20.6-201ENST00000517251 LCE1EQ5T753 118 aa0.71□□□□□ -2.3
SCARNA20.6-201ENST00000517251 KRTAP4-11Q9BYQ6 195 aa0.7□□□□□ -2.3
SCARNA20.6-201ENST00000517251 KRTAP5-7Q6L8G8 165 aa0.69□□□□□ -2.3
SCARNA20.6-201ENST00000517251 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
SCARNA20.6-201ENST00000517251 LCE1CQ5T751 118 aa0.68□□□□□ -2.3
SCARNA20.6-201ENST00000517251 LCE1BQ5T7P3 118 aa0.68□□□□□ -2.3
SCARNA20.6-201ENST00000517251 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.68□□□□□ -2.3
SCARNA20.6-201ENST00000517251 KRTAP5-8O75690 187 aa0.67□□□□□ -2.3
SCARNA20.6-201ENST00000517251 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
SCARNA20.6-201ENST00000517251 KRTAP5-11Q6L8G4 156 aa0.62□□□□□ -2.31
SCARNA20.6-201ENST00000517251 KRTAP4-4Q9BYR3 166 aa0.57□□□□□ -2.32
SCARNA20.6-201ENST00000517251 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
SCARNA20.6-201ENST00000517251 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
SCARNA20.6-201ENST00000517251 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
SCARNA20.6-201ENST00000517251 MUC19Q7Z5P9 8384 aa0.47□□□□□ -2.33
SCARNA20.6-201ENST00000517251 LCE1FQ5T754 118 aa0.47□□□□□ -2.33
SCARNA20.6-201ENST00000517251 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms