RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 KRTAP10-7P60409 375 aaPredicted RBP1.25□□□□□ -2.21
RNU4ATAC3P-201ENST00000516699 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
RNU4ATAC3P-201ENST00000516699 HMCN2Q8NDA2 5059 aa1.22□□□□□ -2.21
RNU4ATAC3P-201ENST00000516699 MUC2Q02817 5179 aa1.21□□□□□ -2.21
RNU4ATAC3P-201ENST00000516699 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 MT1EP04732 61 aa1.16□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
RNU4ATAC3P-201ENST00000516699 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 MT1LQ93083 61 aa1.15□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 KRTAP9-6A8MVA2 160 aa1.11□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 MT1GP13640 62 aa1.11□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 LCE1AQ5T7P2 110 aa1.09□□□□□ -2.23
RNU4ATAC3P-201ENST00000516699 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 MT1MQ8N339 61 aa1.07□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 CRCT1Q9UGL9 99 aa1.07□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 MT1AP04731 61 aa1.06□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 KRTAP12-4P60329 112 aa1.04□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 KRTAP2-2Q9BYT5 123 aa1.04□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
RNU4ATAC3P-201ENST00000516699 USH2AO75445 5202 aa1.02□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 LCE1EQ5T753 118 aa1□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 LCE3DQ9BYE3 92 aa1□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 LCE3EQ5T5B0 92 aa0.99□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 KRTAP4-4Q9BYR3 166 aa0.99□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 KMT2DO14686 5537 aa0.99□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 KRTAP5-9P26371 169 aa0.98□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 KRTAP5-4Q6L8H1 288 aa0.98□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 KRTAP4-3Q9BYR4 195 aa0.98□□□□□ -2.25
RNU4ATAC3P-201ENST00000516699 GPR98Q8WXG9 6306 aa0.96□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 KRTAP5-5Q701N2 237 aaPredicted RBP0.95□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 SPRR2AP35326 72 aa0.94□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 NEBP20929 6669 aa0.93□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 SPRR2EP22531 72 aa0.93□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 MT3P25713 68 aa0.93□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 SPRR2BP35325 72 aa0.93□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 OBSCNQ5VST9 7968 aa0.91□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 PRM1P04553 51 aa0.91□□□□□ -2.26
RNU4ATAC3P-201ENST00000516699 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 SPRR2DP22532 72 aa0.9□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 MACF1Q9UPN3 7388 aaKnown RBP0.9□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 KRTAP6-3Q3LI67 103 aa0.87□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 KRTAP5-2Q701N4 177 aa0.84□□□□□ -2.27
RNU4ATAC3P-201ENST00000516699 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
RNU4ATAC3P-201ENST00000516699 LCE1FQ5T754 118 aa0.8□□□□□ -2.28
RNU4ATAC3P-201ENST00000516699 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
RNU4ATAC3P-201ENST00000516699 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
RNU4ATAC3P-201ENST00000516699 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 MT4P47944 62 aa0.74□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
RNU4ATAC3P-201ENST00000516699 LCE1CQ5T751 118 aa0.71□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 LCE1BQ5T7P3 118 aa0.71□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 HMCN1Q96RW7 5635 aa0.7□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 KRTAP5-8O75690 187 aa0.69□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
RNU4ATAC3P-201ENST00000516699 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
RNU4ATAC3P-201ENST00000516699 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
RNU4ATAC3P-201ENST00000516699 MUC19Q7Z5P9 8384 aa0.6□□□□□ -2.31
RNU4ATAC3P-201ENST00000516699 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
RNU4ATAC3P-201ENST00000516699 MUC16Q8WXI7 14507 aa0.28□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 162.8 ms