RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 KIAA1109Q2LD37 5005 aa3.23□□□□□ -1.89
TRIM41-209ENST00000515834 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
TRIM41-209ENST00000515834 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
TRIM41-209ENST00000515834 HERC2O95714 4834 aa3.22□□□□□ -1.89
TRIM41-209ENST00000515834 TNXBP22105 4242 aa3.21□□□□□ -1.89
TRIM41-209ENST00000515834 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
TRIM41-209ENST00000515834 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
TRIM41-209ENST00000515834 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
TRIM41-209ENST00000515834 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
TRIM41-209ENST00000515834 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
TRIM41-209ENST00000515834 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
TRIM41-209ENST00000515834 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TRIM41-209ENST00000515834 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
TRIM41-209ENST00000515834 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
TRIM41-209ENST00000515834 MT1AP04731 61 aa3.14□□□□□ -1.91
TRIM41-209ENST00000515834 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
TRIM41-209ENST00000515834 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
TRIM41-209ENST00000515834 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
TRIM41-209ENST00000515834 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
TRIM41-209ENST00000515834 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
TRIM41-209ENST00000515834 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
TRIM41-209ENST00000515834 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
TRIM41-209ENST00000515834 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.92
TRIM41-209ENST00000515834 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
TRIM41-209ENST00000515834 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
TRIM41-209ENST00000515834 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
TRIM41-209ENST00000515834 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
TRIM41-209ENST00000515834 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
TRIM41-209ENST00000515834 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
TRIM41-209ENST00000515834 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
TRIM41-209ENST00000515834 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
TRIM41-209ENST00000515834 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
TRIM41-209ENST00000515834 MUC2Q02817 5179 aa2.93□□□□□ -1.94
TRIM41-209ENST00000515834 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TRIM41-209ENST00000515834 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.96
TRIM41-209ENST00000515834 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
TRIM41-209ENST00000515834 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
TRIM41-209ENST00000515834 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
TRIM41-209ENST00000515834 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
TRIM41-209ENST00000515834 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
TRIM41-209ENST00000515834 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
TRIM41-209ENST00000515834 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
TRIM41-209ENST00000515834 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
TRIM41-209ENST00000515834 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
TRIM41-209ENST00000515834 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
TRIM41-209ENST00000515834 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
TRIM41-209ENST00000515834 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
TRIM41-209ENST00000515834 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
TRIM41-209ENST00000515834 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
TRIM41-209ENST00000515834 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
TRIM41-209ENST00000515834 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
TRIM41-209ENST00000515834 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TRIM41-209ENST00000515834 USH2AO75445 5202 aa2.43□□□□□ -2.02
TRIM41-209ENST00000515834 NEBP20929 6669 aa2.41□□□□□ -2.02
TRIM41-209ENST00000515834 KMT2DO14686 5537 aa2.36□□□□□ -2.03
TRIM41-209ENST00000515834 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
TRIM41-209ENST00000515834 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
TRIM41-209ENST00000515834 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
TRIM41-209ENST00000515834 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
TRIM41-209ENST00000515834 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
TRIM41-209ENST00000515834 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
TRIM41-209ENST00000515834 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
TRIM41-209ENST00000515834 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TRIM41-209ENST00000515834 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
TRIM41-209ENST00000515834 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
TRIM41-209ENST00000515834 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
TRIM41-209ENST00000515834 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
TRIM41-209ENST00000515834 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
TRIM41-209ENST00000515834 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
TRIM41-209ENST00000515834 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
TRIM41-209ENST00000515834 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
TRIM41-209ENST00000515834 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
TRIM41-209ENST00000515834 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
TRIM41-209ENST00000515834 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
TRIM41-209ENST00000515834 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TRIM41-209ENST00000515834 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
TRIM41-209ENST00000515834 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
TRIM41-209ENST00000515834 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 144 ms