RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 SPRR2EP22531 72 aa4.61□□□□□ -1.67
LMNA-224ENST00000515711 SPRR2BP35325 72 aa4.61□□□□□ -1.67
LMNA-224ENST00000515711 SPRR2AP35326 72 aa4.61□□□□□ -1.67
LMNA-224ENST00000515711 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
LMNA-224ENST00000515711 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
LMNA-224ENST00000515711 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
LMNA-224ENST00000515711 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
LMNA-224ENST00000515711 SPRR2DP22532 72 aa4.46□□□□□ -1.7
LMNA-224ENST00000515711 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
LMNA-224ENST00000515711 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
LMNA-224ENST00000515711 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
LMNA-224ENST00000515711 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
LMNA-224ENST00000515711 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
LMNA-224ENST00000515711 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
LMNA-224ENST00000515711 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
LMNA-224ENST00000515711 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
LMNA-224ENST00000515711 MT1EP04732 61 aa4.32□□□□□ -1.72
LMNA-224ENST00000515711 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
LMNA-224ENST00000515711 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
LMNA-224ENST00000515711 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
LMNA-224ENST00000515711 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
LMNA-224ENST00000515711 MT1LQ93083 61 aa4.24□□□□□ -1.73
LMNA-224ENST00000515711 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
LMNA-224ENST00000515711 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
LMNA-224ENST00000515711 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
LMNA-224ENST00000515711 MT1GP13640 62 aa4.13□□□□□ -1.75
LMNA-224ENST00000515711 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
LMNA-224ENST00000515711 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
LMNA-224ENST00000515711 MT1MQ8N339 61 aa4.07□□□□□ -1.76
LMNA-224ENST00000515711 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
LMNA-224ENST00000515711 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
LMNA-224ENST00000515711 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
LMNA-224ENST00000515711 MT4P47944 62 aa3.99□□□□□ -1.77
LMNA-224ENST00000515711 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
LMNA-224ENST00000515711 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
LMNA-224ENST00000515711 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
LMNA-224ENST00000515711 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
LMNA-224ENST00000515711 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
LMNA-224ENST00000515711 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
LMNA-224ENST00000515711 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
LMNA-224ENST00000515711 H3BS24 57 aa3.73□□□□□ -1.81
LMNA-224ENST00000515711 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
LMNA-224ENST00000515711 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
LMNA-224ENST00000515711 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
LMNA-224ENST00000515711 MT1AP04731 61 aa3.64□□□□□ -1.83
LMNA-224ENST00000515711 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
LMNA-224ENST00000515711 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
LMNA-224ENST00000515711 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
LMNA-224ENST00000515711 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
LMNA-224ENST00000515711 INE1O15225 51 aa3.5□□□□□ -1.85
LMNA-224ENST00000515711 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
LMNA-224ENST00000515711 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
LMNA-224ENST00000515711 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
LMNA-224ENST00000515711 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
LMNA-224ENST00000515711 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
LMNA-224ENST00000515711 MT3P25713 68 aa3.3□□□□□ -1.88
LMNA-224ENST00000515711 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
LMNA-224ENST00000515711 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
LMNA-224ENST00000515711 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
LMNA-224ENST00000515711 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
LMNA-224ENST00000515711 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
LMNA-224ENST00000515711 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
LMNA-224ENST00000515711 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
LMNA-224ENST00000515711 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
LMNA-224ENST00000515711 PRM1P04553 51 aa2.73□□□□□ -1.97
LMNA-224ENST00000515711 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
LMNA-224ENST00000515711 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LMNA-224ENST00000515711 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
LMNA-224ENST00000515711 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
LMNA-224ENST00000515711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
LMNA-224ENST00000515711 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
LMNA-224ENST00000515711 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
LMNA-224ENST00000515711 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
LMNA-224ENST00000515711 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
LMNA-224ENST00000515711 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
LMNA-224ENST00000515711 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
LMNA-224ENST00000515711 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
LMNA-224ENST00000515711 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 202 ms