RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 KRTAP10-5P60370 271 aa2.69□□□□□ -1.98
CALCOCO2-224ENST00000514962 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
CALCOCO2-224ENST00000514962 SSPOA2VEC9 5147 aa2.65□□□□□ -1.98
CALCOCO2-224ENST00000514962 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
CALCOCO2-224ENST00000514962 NEBP20929 6669 aa2.63□□□□□ -1.99
CALCOCO2-224ENST00000514962 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
CALCOCO2-224ENST00000514962 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
CALCOCO2-224ENST00000514962 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
CALCOCO2-224ENST00000514962 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
CALCOCO2-224ENST00000514962 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
CALCOCO2-224ENST00000514962 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
CALCOCO2-224ENST00000514962 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
CALCOCO2-224ENST00000514962 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
CALCOCO2-224ENST00000514962 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
CALCOCO2-224ENST00000514962 LRP2P98164 4655 aa2.49□□□□□ -2.01
CALCOCO2-224ENST00000514962 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
CALCOCO2-224ENST00000514962 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
CALCOCO2-224ENST00000514962 LPAP08519 4548 aa2.47□□□□□ -2.01
CALCOCO2-224ENST00000514962 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
CALCOCO2-224ENST00000514962 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CALCOCO2-224ENST00000514962 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
CALCOCO2-224ENST00000514962 MT1XP80297 61 aa2.39□□□□□ -2.03
CALCOCO2-224ENST00000514962 MT2AP02795 61 aa2.38□□□□□ -2.03
CALCOCO2-224ENST00000514962 MT1FP04733 61 aa2.36□□□□□ -2.03
CALCOCO2-224ENST00000514962 MT1BP07438 61 aa2.36□□□□□ -2.03
CALCOCO2-224ENST00000514962 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
CALCOCO2-224ENST00000514962 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
CALCOCO2-224ENST00000514962 M0R2T5 61 aa2.35□□□□□ -2.03
CALCOCO2-224ENST00000514962 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
CALCOCO2-224ENST00000514962 KMT2DO14686 5537 aa2.34□□□□□ -2.03
CALCOCO2-224ENST00000514962 MT1HP80294 61 aa2.34□□□□□ -2.03
CALCOCO2-224ENST00000514962 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
CALCOCO2-224ENST00000514962 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
CALCOCO2-224ENST00000514962 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
CALCOCO2-224ENST00000514962 USH2AO75445 5202 aa2.31□□□□□ -2.04
CALCOCO2-224ENST00000514962 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
CALCOCO2-224ENST00000514962 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
CALCOCO2-224ENST00000514962 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CALCOCO2-224ENST00000514962 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
CALCOCO2-224ENST00000514962 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
CALCOCO2-224ENST00000514962 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CALCOCO2-224ENST00000514962 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
CALCOCO2-224ENST00000514962 MT1LQ93083 61 aa2.11□□□□□ -2.07
CALCOCO2-224ENST00000514962 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
CALCOCO2-224ENST00000514962 MT1EP04732 61 aa2.08□□□□□ -2.08
CALCOCO2-224ENST00000514962 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CALCOCO2-224ENST00000514962 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
CALCOCO2-224ENST00000514962 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
CALCOCO2-224ENST00000514962 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
CALCOCO2-224ENST00000514962 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
CALCOCO2-224ENST00000514962 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
CALCOCO2-224ENST00000514962 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
CALCOCO2-224ENST00000514962 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
CALCOCO2-224ENST00000514962 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CALCOCO2-224ENST00000514962 MT1AP04731 61 aa1.95□□□□□ -2.1
CALCOCO2-224ENST00000514962 MT1GP13640 62 aa1.92□□□□□ -2.1
CALCOCO2-224ENST00000514962 MT1MQ8N339 61 aa1.92□□□□□ -2.1
CALCOCO2-224ENST00000514962 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
CALCOCO2-224ENST00000514962 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
CALCOCO2-224ENST00000514962 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
CALCOCO2-224ENST00000514962 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
CALCOCO2-224ENST00000514962 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
CALCOCO2-224ENST00000514962 PRM1P04553 51 aa1.84□□□□□ -2.11
CALCOCO2-224ENST00000514962 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
CALCOCO2-224ENST00000514962 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
CALCOCO2-224ENST00000514962 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CALCOCO2-224ENST00000514962 SPRR2EP22531 72 aa1.67□□□□□ -2.14
CALCOCO2-224ENST00000514962 SPRR2BP35325 72 aa1.67□□□□□ -2.14
CALCOCO2-224ENST00000514962 SPRR2AP35326 72 aa1.67□□□□□ -2.14
CALCOCO2-224ENST00000514962 SPRR2DP22532 72 aa1.62□□□□□ -2.15
CALCOCO2-224ENST00000514962 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
CALCOCO2-224ENST00000514962 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CALCOCO2-224ENST00000514962 MT4P47944 62 aa1.45□□□□□ -2.18
CALCOCO2-224ENST00000514962 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
CALCOCO2-224ENST00000514962 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
CALCOCO2-224ENST00000514962 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
CALCOCO2-224ENST00000514962 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
CALCOCO2-224ENST00000514962 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms