RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 MT1EP04732 61 aa2.87□□□□□ -1.95
GPBP1-208ENST00000514387 MT1LQ93083 61 aa2.86□□□□□ -1.95
GPBP1-208ENST00000514387 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
GPBP1-208ENST00000514387 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
GPBP1-208ENST00000514387 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
GPBP1-208ENST00000514387 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
GPBP1-208ENST00000514387 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
GPBP1-208ENST00000514387 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
GPBP1-208ENST00000514387 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
GPBP1-208ENST00000514387 MT1AP04731 61 aa2.73□□□□□ -1.97
GPBP1-208ENST00000514387 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
GPBP1-208ENST00000514387 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.67□□□□□ -1.98
GPBP1-208ENST00000514387 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
GPBP1-208ENST00000514387 MT1GP13640 62 aa2.62□□□□□ -1.99
GPBP1-208ENST00000514387 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
GPBP1-208ENST00000514387 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
GPBP1-208ENST00000514387 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
GPBP1-208ENST00000514387 MT1MQ8N339 61 aa2.59□□□□□ -1.99
GPBP1-208ENST00000514387 USH2AO75445 5202 aa2.59□□□□□ -2
GPBP1-208ENST00000514387 PRM1P04553 51 aa2.57□□□□□ -2
GPBP1-208ENST00000514387 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
GPBP1-208ENST00000514387 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
GPBP1-208ENST00000514387 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
GPBP1-208ENST00000514387 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
GPBP1-208ENST00000514387 LCE3BQ5TA77 95 aa2.54□□□□□ -2
GPBP1-208ENST00000514387 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
GPBP1-208ENST00000514387 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
GPBP1-208ENST00000514387 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
GPBP1-208ENST00000514387 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
GPBP1-208ENST00000514387 KMT2DO14686 5537 aa2.5□□□□□ -2.01
GPBP1-208ENST00000514387 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
GPBP1-208ENST00000514387 MT3P25713 68 aa2.48□□□□□ -2.01
GPBP1-208ENST00000514387 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
GPBP1-208ENST00000514387 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
GPBP1-208ENST00000514387 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
GPBP1-208ENST00000514387 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
GPBP1-208ENST00000514387 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
GPBP1-208ENST00000514387 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
GPBP1-208ENST00000514387 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
GPBP1-208ENST00000514387 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
GPBP1-208ENST00000514387 SPRR2AP35326 72 aa2.33□□□□□ -2.04
GPBP1-208ENST00000514387 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
GPBP1-208ENST00000514387 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
GPBP1-208ENST00000514387 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
GPBP1-208ENST00000514387 SPRR2EP22531 72 aa2.25□□□□□ -2.05
GPBP1-208ENST00000514387 SPRR2BP35325 72 aa2.25□□□□□ -2.05
GPBP1-208ENST00000514387 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
GPBP1-208ENST00000514387 NEBP20929 6669 aa2.21□□□□□ -2.06
GPBP1-208ENST00000514387 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
GPBP1-208ENST00000514387 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
GPBP1-208ENST00000514387 SPRR2DP22532 72 aa2.17□□□□□ -2.06
GPBP1-208ENST00000514387 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
GPBP1-208ENST00000514387 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
GPBP1-208ENST00000514387 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
GPBP1-208ENST00000514387 MT4P47944 62 aa1.95□□□□□ -2.1
GPBP1-208ENST00000514387 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
GPBP1-208ENST00000514387 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
GPBP1-208ENST00000514387 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
GPBP1-208ENST00000514387 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
GPBP1-208ENST00000514387 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
GPBP1-208ENST00000514387 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
GPBP1-208ENST00000514387 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
GPBP1-208ENST00000514387 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
GPBP1-208ENST00000514387 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
GPBP1-208ENST00000514387 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
GPBP1-208ENST00000514387 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
GPBP1-208ENST00000514387 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
GPBP1-208ENST00000514387 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
GPBP1-208ENST00000514387 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
GPBP1-208ENST00000514387 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
GPBP1-208ENST00000514387 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
GPBP1-208ENST00000514387 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
GPBP1-208ENST00000514387 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
GPBP1-208ENST00000514387 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
GPBP1-208ENST00000514387 KRTAP4-4Q9BYR3 166 aa1.28□□□□□ -2.2
GPBP1-208ENST00000514387 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
GPBP1-208ENST00000514387 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms