RNA–Protein interactions for RNA: ENST00000513439.5

MTRR-223, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, human

TSL 1 (best)

Gene MTRR, Length 2,441 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTRR-223	ENST00000513439	KRTAP2-4	Q9BYR9	128 aa		5.11	□□□□□ -1.59
MTRR-223	ENST00000513439	KRTAP2-1	Q9BYU5	128 aa		5.11	□□□□□ -1.59
MTRR-223	ENST00000513439	MT1L	Q93083	61 aa		5.07	□□□□□ -1.6
MTRR-223	ENST00000513439	KRTAP4-7	Q9BYR0	210 aa		5.03	□□□□□ -1.6
MTRR-223	ENST00000513439	KRTAP19-4	Q3LI73	84 aa		5.02	□□□□□ -1.61
MTRR-223	ENST00000513439	LOC100996750	A0A140TA64	210 aa		4.99	□□□□□ -1.61
MTRR-223	ENST00000513439	KRTAP4-6	Q9BYQ5	205 aa		4.99	□□□□□ -1.61
MTRR-223	ENST00000513439	KRTAP9-6	A0A140TA67	174 aa		4.94	□□□□□ -1.62
MTRR-223	ENST00000513439	MACF1	Q9UPN3	7388 aa	Known RBP	4.93	□□□□□ -1.62
MTRR-223	ENST00000513439	MUC12	Q9UKN1	5478 aa		4.93	□□□□□ -1.62
MTRR-223	ENST00000513439	KRTAP19-3	Q7Z4W3	81 aa		4.88	□□□□□ -1.63
MTRR-223	ENST00000513439	SPRR2F	Q96RM1	72 aa		4.87	□□□□□ -1.63
MTRR-223	ENST00000513439	MT1G	P13640	62 aa		4.85	□□□□□ -1.63
MTRR-223	ENST00000513439	MT1M	Q8N339	61 aa		4.82	□□□□□ -1.64
MTRR-223	ENST00000513439	KRTAP4-3	Q9BYR4	195 aa		4.81	□□□□□ -1.64
MTRR-223	ENST00000513439	SYNE2	Q8WXH0	6885 aa	Known RBP	4.79	□□□□□ -1.64
MTRR-223	ENST00000513439	LCE5A	Q5TCM9	118 aa		4.76	□□□□□ -1.65
MTRR-223	ENST00000513439	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.75	□□□□□ -1.65
MTRR-223	ENST00000513439	LCE4A	Q5TA78	99 aa		4.75	□□□□□ -1.65
MTRR-223	ENST00000513439	KRTAP4-12	Q9BQ66	201 aa		4.73	□□□□□ -1.65
MTRR-223	ENST00000513439	KRTAP5-9	P26371	169 aa		4.7	□□□□□ -1.66
MTRR-223	ENST00000513439	KRTAP9-7	A8MTY7	169 aa		4.65	□□□□□ -1.66
MTRR-223	ENST00000513439	KRTAP12-4	P60329	112 aa		4.63	□□□□□ -1.67
MTRR-223	ENST00000513439	MDN1	Q9NU22	5596 aa		4.62	□□□□□ -1.67
MTRR-223	ENST00000513439	DST	Q03001	7570 aa	Known RBP	4.62	□□□□□ -1.67
MTRR-223	ENST00000513439	KRTAP6-3	Q3LI67	103 aa		4.61	□□□□□ -1.67
MTRR-223	ENST00000513439	LCE1A	Q5T7P2	110 aa		4.61	□□□□□ -1.67
MTRR-223	ENST00000513439	LCE3B	Q5TA77	95 aa		4.56	□□□□□ -1.68
MTRR-223	ENST00000513439	SPRR2E	P22531	72 aa		4.54	□□□□□ -1.68
MTRR-223	ENST00000513439	SPRR2B	P35325	72 aa		4.54	□□□□□ -1.68
MTRR-223	ENST00000513439	SPRR2A	P35326	72 aa		4.54	□□□□□ -1.68
MTRR-223	ENST00000513439	KRTAP9-9	Q9BYP9	154 aa		4.5	□□□□□ -1.69
MTRR-223	ENST00000513439	KRTAP9-4	Q9BYQ2	154 aa		4.5	□□□□□ -1.69
MTRR-223	ENST00000513439	SPRR2D	P22532	72 aa		4.36	□□□□□ -1.71
MTRR-223	ENST00000513439	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.31	□□□□□ -1.72
MTRR-223	ENST00000513439	KRTAP6-1	Q3LI64	71 aa		4.3	□□□□□ -1.72
MTRR-223	ENST00000513439	NEB	P20929	6669 aa		4.29	□□□□□ -1.72
MTRR-223	ENST00000513439	MT1A	P04731	61 aa		4.29	□□□□□ -1.72
MTRR-223	ENST00000513439	LCE1D	Q5T752	114 aa		4.25	□□□□□ -1.73
MTRR-223	ENST00000513439	KRTAP4-9	Q9BYQ8	210 aa		4.25	□□□□□ -1.73
MTRR-223	ENST00000513439	SYNE1	Q8NF91	8797 aa	Known RBP	4.18	□□□□□ -1.74
MTRR-223	ENST00000513439	PRM1	P04553	51 aa		4.15	□□□□□ -1.74
MTRR-223	ENST00000513439	LCE3D	Q9BYE3	92 aa		4.15	□□□□□ -1.74
MTRR-223	ENST00000513439	LCE3E	Q5T5B0	92 aa		4.14	□□□□□ -1.75
MTRR-223	ENST00000513439	KRTAP4-11	Q9BYQ6	195 aa		4.02	□□□□□ -1.77
MTRR-223	ENST00000513439	KRTAP20-1	Q3LI63	56 aa		4.01	□□□□□ -1.77
MTRR-223	ENST00000513439	KRTAP5-4	Q6L8H1	288 aa		3.98	□□□□□ -1.77
MTRR-223	ENST00000513439	KRTAP2-2	Q9BYT5	123 aa		3.97	□□□□□ -1.77
MTRR-223	ENST00000513439	KRTAP4-2	Q9BYR5	136 aa		3.95	□□□□□ -1.78
MTRR-223	ENST00000513439	KRTAP6-2	Q3LI66	62 aa		3.91	□□□□□ -1.78
MTRR-223	ENST00000513439	MT3	P25713	68 aa		3.87	□□□□□ -1.79
MTRR-223	ENST00000513439	MT4	P47944	62 aa		3.82	□□□□□ -1.8
MTRR-223	ENST00000513439	KRTAP20-2	Q3LI61	65 aa		3.73	□□□□□ -1.81
MTRR-223	ENST00000513439	HMCN1	Q96RW7	5635 aa		3.68	□□□□□ -1.82
MTRR-223	ENST00000513439	OBSCN	Q5VST9	7968 aa		3.67	□□□□□ -1.82
MTRR-223	ENST00000513439	KRTAP5-2	Q701N4	177 aa		3.65	□□□□□ -1.82
MTRR-223	ENST00000513439	KRTAP5-3	Q6L8H2	238 aa		3.58	□□□□□ -1.84
MTRR-223	ENST00000513439	LCE1E	Q5T753	118 aa		3.4	□□□□□ -1.87
MTRR-223	ENST00000513439	LCE1F	Q5T754	118 aa		3.26	□□□□□ -1.89
MTRR-223	ENST00000513439	AHNAK2	Q8IVF2	5795 aa		3.25	□□□□□ -1.89
MTRR-223	ENST00000513439	MUC5AC	P98088	5654 aa		3.19	□□□□□ -1.9
MTRR-223	ENST00000513439	LCE1B	Q5T7P3	118 aa		3.15	□□□□□ -1.9
MTRR-223	ENST00000513439	KRTAP5-1	Q6L8H4	278 aa		3.14	□□□□□ -1.91
MTRR-223	ENST00000513439	KRTAP5-10	Q6L8G5	202 aa		3.1	□□□□□ -1.91
MTRR-223	ENST00000513439	LCE1C	Q5T751	118 aa		3.08	□□□□□ -1.92
MTRR-223	ENST00000513439	KRTAP5-8	O75690	187 aa		3.05	□□□□□ -1.92
MTRR-223	ENST00000513439	KRTAP5-7	Q6L8G8	165 aa		2.97	□□□□□ -1.93
MTRR-223	ENST00000513439	GPR98	Q8WXG9	6306 aa		2.95	□□□□□ -1.94
MTRR-223	ENST00000513439	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.88	□□□□□ -1.95
MTRR-223	ENST00000513439	KRTAP21-2	Q3LI59	83 aa		2.8	□□□□□ -1.96
MTRR-223	ENST00000513439	KRTAP5-11	Q6L8G4	156 aa		2.77	□□□□□ -1.97
MTRR-223	ENST00000513439	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.66	□□□□□ -1.98
MTRR-223	ENST00000513439	KRTAP21-1	Q3LI58	79 aa		2.66	□□□□□ -1.98
MTRR-223	ENST00000513439	KRTAP4-4	Q9BYR3	166 aa		2.53	□□□□□ -2
MTRR-223	ENST00000513439	MUC19	Q7Z5P9	8384 aa		2.47	□□□□□ -2.01
MTRR-223	ENST00000513439	AHNAK	Q09666	5890 aa	Known RBP	2.44	□□□□□ -2.02
MTRR-223	ENST00000513439	PHGR1	C9JFL3	82 aa		2.31	□□□□□ -2.04
MTRR-223	ENST00000513439	MUC16	Q8WXI7	14507 aa		1.51	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 133.1 ms