RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
ARHGEF28-211ENST00000512883 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
ARHGEF28-211ENST00000512883 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
ARHGEF28-211ENST00000512883 MT1GP13640 62 aa5.21□□□□□ -1.58
ARHGEF28-211ENST00000512883 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
ARHGEF28-211ENST00000512883 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
ARHGEF28-211ENST00000512883 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
ARHGEF28-211ENST00000512883 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
ARHGEF28-211ENST00000512883 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
ARHGEF28-211ENST00000512883 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
ARHGEF28-211ENST00000512883 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
ARHGEF28-211ENST00000512883 LCE3BQ5TA77 95 aa4.96□□□□□ -1.61
ARHGEF28-211ENST00000512883 MT1MQ8N339 61 aa4.93□□□□□ -1.62
ARHGEF28-211ENST00000512883 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
ARHGEF28-211ENST00000512883 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
ARHGEF28-211ENST00000512883 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
ARHGEF28-211ENST00000512883 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
ARHGEF28-211ENST00000512883 PRM1P04553 51 aa4.74□□□□□ -1.65
ARHGEF28-211ENST00000512883 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
ARHGEF28-211ENST00000512883 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
ARHGEF28-211ENST00000512883 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
ARHGEF28-211ENST00000512883 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.66
ARHGEF28-211ENST00000512883 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
ARHGEF28-211ENST00000512883 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
ARHGEF28-211ENST00000512883 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
ARHGEF28-211ENST00000512883 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
ARHGEF28-211ENST00000512883 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
ARHGEF28-211ENST00000512883 MT1AP04731 61 aa4.61□□□□□ -1.67
ARHGEF28-211ENST00000512883 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
ARHGEF28-211ENST00000512883 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
ARHGEF28-211ENST00000512883 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
ARHGEF28-211ENST00000512883 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
ARHGEF28-211ENST00000512883 SPRR2EP22531 72 aa4.22□□□□□ -1.73
ARHGEF28-211ENST00000512883 SPRR2BP35325 72 aa4.22□□□□□ -1.73
ARHGEF28-211ENST00000512883 SPRR2AP35326 72 aa4.22□□□□□ -1.73
ARHGEF28-211ENST00000512883 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
ARHGEF28-211ENST00000512883 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
ARHGEF28-211ENST00000512883 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
ARHGEF28-211ENST00000512883 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
ARHGEF28-211ENST00000512883 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
ARHGEF28-211ENST00000512883 SPRR2DP22532 72 aa4.03□□□□□ -1.76
ARHGEF28-211ENST00000512883 MT3P25713 68 aa3.99□□□□□ -1.77
ARHGEF28-211ENST00000512883 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
ARHGEF28-211ENST00000512883 NEBP20929 6669 aa3.76□□□□□ -1.81
ARHGEF28-211ENST00000512883 MT4P47944 62 aa3.66□□□□□ -1.82
ARHGEF28-211ENST00000512883 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
ARHGEF28-211ENST00000512883 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
ARHGEF28-211ENST00000512883 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.84
ARHGEF28-211ENST00000512883 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.84
ARHGEF28-211ENST00000512883 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
ARHGEF28-211ENST00000512883 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
ARHGEF28-211ENST00000512883 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
ARHGEF28-211ENST00000512883 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
ARHGEF28-211ENST00000512883 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
ARHGEF28-211ENST00000512883 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
ARHGEF28-211ENST00000512883 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
ARHGEF28-211ENST00000512883 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
ARHGEF28-211ENST00000512883 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
ARHGEF28-211ENST00000512883 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
ARHGEF28-211ENST00000512883 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
ARHGEF28-211ENST00000512883 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
ARHGEF28-211ENST00000512883 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
ARHGEF28-211ENST00000512883 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
ARHGEF28-211ENST00000512883 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
ARHGEF28-211ENST00000512883 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.93
ARHGEF28-211ENST00000512883 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
ARHGEF28-211ENST00000512883 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
ARHGEF28-211ENST00000512883 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
ARHGEF28-211ENST00000512883 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
ARHGEF28-211ENST00000512883 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
ARHGEF28-211ENST00000512883 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
ARHGEF28-211ENST00000512883 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
ARHGEF28-211ENST00000512883 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
ARHGEF28-211ENST00000512883 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
ARHGEF28-211ENST00000512883 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
ARHGEF28-211ENST00000512883 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
ARHGEF28-211ENST00000512883 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 83.5 ms