RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TNP1P09430 55 aa4.39□□□□□ -1.71
PFDN1-204ENST00000512707 ROMO1P60602 79 aa4.39□□□□□ -1.71
PFDN1-204ENST00000512707 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
PFDN1-204ENST00000512707 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
PFDN1-204ENST00000512707 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
PFDN1-204ENST00000512707 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
PFDN1-204ENST00000512707 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PFDN1-204ENST00000512707 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
PFDN1-204ENST00000512707 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
PFDN1-204ENST00000512707 MT3P25713 68 aa4.29□□□□□ -1.72
PFDN1-204ENST00000512707 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
PFDN1-204ENST00000512707 KMT2DO14686 5537 aa4.24□□□□□ -1.73
PFDN1-204ENST00000512707 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
PFDN1-204ENST00000512707 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
PFDN1-204ENST00000512707 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
PFDN1-204ENST00000512707 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
PFDN1-204ENST00000512707 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
PFDN1-204ENST00000512707 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
PFDN1-204ENST00000512707 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
PFDN1-204ENST00000512707 SPRR2EP22531 72 aa4.08□□□□□ -1.76
PFDN1-204ENST00000512707 SPRR2BP35325 72 aa4.08□□□□□ -1.76
PFDN1-204ENST00000512707 SPRR2AP35326 72 aa4.08□□□□□ -1.76
PFDN1-204ENST00000512707 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
PFDN1-204ENST00000512707 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
PFDN1-204ENST00000512707 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
PFDN1-204ENST00000512707 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
PFDN1-204ENST00000512707 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
PFDN1-204ENST00000512707 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
PFDN1-204ENST00000512707 MT1EP04732 61 aa3.98□□□□□ -1.77
PFDN1-204ENST00000512707 SPRR2DP22532 72 aa3.95□□□□□ -1.78
PFDN1-204ENST00000512707 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
PFDN1-204ENST00000512707 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
PFDN1-204ENST00000512707 MT1LQ93083 61 aa3.87□□□□□ -1.79
PFDN1-204ENST00000512707 MT1GP13640 62 aa3.84□□□□□ -1.79
PFDN1-204ENST00000512707 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
PFDN1-204ENST00000512707 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
PFDN1-204ENST00000512707 MT1MQ8N339 61 aa3.76□□□□□ -1.81
PFDN1-204ENST00000512707 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
PFDN1-204ENST00000512707 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
PFDN1-204ENST00000512707 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
PFDN1-204ENST00000512707 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
PFDN1-204ENST00000512707 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
PFDN1-204ENST00000512707 MT4P47944 62 aa3.47□□□□□ -1.85
PFDN1-204ENST00000512707 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PFDN1-204ENST00000512707 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
PFDN1-204ENST00000512707 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
PFDN1-204ENST00000512707 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
PFDN1-204ENST00000512707 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
PFDN1-204ENST00000512707 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
PFDN1-204ENST00000512707 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
PFDN1-204ENST00000512707 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
PFDN1-204ENST00000512707 MT1AP04731 61 aa3.31□□□□□ -1.88
PFDN1-204ENST00000512707 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
PFDN1-204ENST00000512707 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
PFDN1-204ENST00000512707 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
PFDN1-204ENST00000512707 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
PFDN1-204ENST00000512707 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
PFDN1-204ENST00000512707 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
PFDN1-204ENST00000512707 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
PFDN1-204ENST00000512707 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
PFDN1-204ENST00000512707 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
PFDN1-204ENST00000512707 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PFDN1-204ENST00000512707 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
PFDN1-204ENST00000512707 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
PFDN1-204ENST00000512707 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
PFDN1-204ENST00000512707 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
PFDN1-204ENST00000512707 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
PFDN1-204ENST00000512707 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
PFDN1-204ENST00000512707 INE1O15225 51 aa2.64□□□□□ -1.99
PFDN1-204ENST00000512707 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
PFDN1-204ENST00000512707 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
PFDN1-204ENST00000512707 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PFDN1-204ENST00000512707 PRM1P04553 51 aa2.25□□□□□ -2.05
PFDN1-204ENST00000512707 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PFDN1-204ENST00000512707 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
PFDN1-204ENST00000512707 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
PFDN1-204ENST00000512707 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
PFDN1-204ENST00000512707 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 100.7 ms