RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 MT3P25713 68 aa2.2□□□□□ -2.06
TRAPPC11-208ENST00000511955 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC11-208ENST00000511955 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
TRAPPC11-208ENST00000511955 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
TRAPPC11-208ENST00000511955 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
TRAPPC11-208ENST00000511955 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TRAPPC11-208ENST00000511955 USH2AO75445 5202 aa2.14□□□□□ -2.07
TRAPPC11-208ENST00000511955 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
TRAPPC11-208ENST00000511955 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
TRAPPC11-208ENST00000511955 MT2AP02795 61 aa2.11□□□□□ -2.07
TRAPPC11-208ENST00000511955 M0QZ58 72 aa2.09□□□□□ -2.07
TRAPPC11-208ENST00000511955 MT1FP04733 61 aa2.09□□□□□ -2.07
TRAPPC11-208ENST00000511955 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
TRAPPC11-208ENST00000511955 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
TRAPPC11-208ENST00000511955 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
TRAPPC11-208ENST00000511955 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
TRAPPC11-208ENST00000511955 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
TRAPPC11-208ENST00000511955 KRTAP10-12P60413 245 aa1.98□□□□□ -2.09
TRAPPC11-208ENST00000511955 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-208ENST00000511955 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
TRAPPC11-208ENST00000511955 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
TRAPPC11-208ENST00000511955 SPRR2GQ9BYE4 73 aa1.95□□□□□ -2.1
TRAPPC11-208ENST00000511955 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
TRAPPC11-208ENST00000511955 MT1BP07438 61 aa1.93□□□□□ -2.1
TRAPPC11-208ENST00000511955 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
TRAPPC11-208ENST00000511955 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC11-208ENST00000511955 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.1
TRAPPC11-208ENST00000511955 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.1
TRAPPC11-208ENST00000511955 KMT2DO14686 5537 aa1.88□□□□□ -2.11
TRAPPC11-208ENST00000511955 TNP1P09430 55 aa1.88□□□□□ -2.11
TRAPPC11-208ENST00000511955 KRTAP10-5P60370 271 aa1.85□□□□□ -2.11
TRAPPC11-208ENST00000511955 KRTAP4-3Q9BYR4 195 aa1.85□□□□□ -2.11
TRAPPC11-208ENST00000511955 MT1XP80297 61 aa1.84□□□□□ -2.12
TRAPPC11-208ENST00000511955 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.12
TRAPPC11-208ENST00000511955 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
TRAPPC11-208ENST00000511955 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
TRAPPC11-208ENST00000511955 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
TRAPPC11-208ENST00000511955 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
TRAPPC11-208ENST00000511955 NEBP20929 6669 aa1.71□□□□□ -2.14
TRAPPC11-208ENST00000511955 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
TRAPPC11-208ENST00000511955 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
TRAPPC11-208ENST00000511955 LCE3AQ5TA76 89 aa1.69□□□□□ -2.14
TRAPPC11-208ENST00000511955 SPRR2EP22531 72 aa1.68□□□□□ -2.14
TRAPPC11-208ENST00000511955 SPRR2BP35325 72 aa1.68□□□□□ -2.14
TRAPPC11-208ENST00000511955 SPRR2AP35326 72 aa1.68□□□□□ -2.14
TRAPPC11-208ENST00000511955 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
TRAPPC11-208ENST00000511955 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
TRAPPC11-208ENST00000511955 KRTAP9-6A8MVA2 160 aa1.65□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP19-7Q3SYF9 63 aa1.64□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC11-208ENST00000511955 MT1EP04732 61 aa1.62□□□□□ -2.15
TRAPPC11-208ENST00000511955 SPRR2DP22532 72 aa1.62□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
TRAPPC11-208ENST00000511955 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
TRAPPC11-208ENST00000511955 MT1LQ93083 61 aa1.56□□□□□ -2.16
TRAPPC11-208ENST00000511955 MT1GP13640 62 aa1.54□□□□□ -2.16
TRAPPC11-208ENST00000511955 MT1MQ8N339 61 aa1.54□□□□□ -2.16
TRAPPC11-208ENST00000511955 MT4P47944 62 aa1.45□□□□□ -2.18
TRAPPC11-208ENST00000511955 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
TRAPPC11-208ENST00000511955 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
TRAPPC11-208ENST00000511955 PRM1P04553 51 aa1.41□□□□□ -2.18
TRAPPC11-208ENST00000511955 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
TRAPPC11-208ENST00000511955 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
TRAPPC11-208ENST00000511955 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
TRAPPC11-208ENST00000511955 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
TRAPPC11-208ENST00000511955 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
TRAPPC11-208ENST00000511955 MT1AP04731 61 aa1.31□□□□□ -2.2
TRAPPC11-208ENST00000511955 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
TRAPPC11-208ENST00000511955 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
TRAPPC11-208ENST00000511955 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
TRAPPC11-208ENST00000511955 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
TRAPPC11-208ENST00000511955 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
TRAPPC11-208ENST00000511955 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
TRAPPC11-208ENST00000511955 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 139.1 ms