RNA–Protein interactions for RNA: ENST00000511782.5

CAST-236, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-236ENST00000511782 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
CAST-236ENST00000511782 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
CAST-236ENST00000511782 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
CAST-236ENST00000511782 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
CAST-236ENST00000511782 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
CAST-236ENST00000511782 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
CAST-236ENST00000511782 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CAST-236ENST00000511782 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
CAST-236ENST00000511782 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
CAST-236ENST00000511782 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CAST-236ENST00000511782 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
CAST-236ENST00000511782 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
CAST-236ENST00000511782 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
CAST-236ENST00000511782 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
CAST-236ENST00000511782 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
CAST-236ENST00000511782 MT1LQ93083 61 aa2.82□□□□□ -1.96
CAST-236ENST00000511782 MT1EP04732 61 aa2.81□□□□□ -1.96
CAST-236ENST00000511782 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
CAST-236ENST00000511782 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
CAST-236ENST00000511782 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
CAST-236ENST00000511782 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
CAST-236ENST00000511782 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.97
CAST-236ENST00000511782 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.97
CAST-236ENST00000511782 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
CAST-236ENST00000511782 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
CAST-236ENST00000511782 MT1GP13640 62 aa2.68□□□□□ -1.98
CAST-236ENST00000511782 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
CAST-236ENST00000511782 NEBP20929 6669 aa2.64□□□□□ -1.99
CAST-236ENST00000511782 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
CAST-236ENST00000511782 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
CAST-236ENST00000511782 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
CAST-236ENST00000511782 MT1MQ8N339 61 aa2.62□□□□□ -1.99
CAST-236ENST00000511782 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CAST-236ENST00000511782 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
CAST-236ENST00000511782 KRTAP12-4P60329 112 aa2.54□□□□□ -2
CAST-236ENST00000511782 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
CAST-236ENST00000511782 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
CAST-236ENST00000511782 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
CAST-236ENST00000511782 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CAST-236ENST00000511782 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
CAST-236ENST00000511782 SPRR2EP22531 72 aa2.4□□□□□ -2.03
CAST-236ENST00000511782 SPRR2BP35325 72 aa2.4□□□□□ -2.03
CAST-236ENST00000511782 SPRR2AP35326 72 aa2.4□□□□□ -2.03
CAST-236ENST00000511782 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CAST-236ENST00000511782 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
CAST-236ENST00000511782 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
CAST-236ENST00000511782 MT1AP04731 61 aa2.33□□□□□ -2.04
CAST-236ENST00000511782 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CAST-236ENST00000511782 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CAST-236ENST00000511782 SPRR2DP22532 72 aa2.3□□□□□ -2.04
CAST-236ENST00000511782 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CAST-236ENST00000511782 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CAST-236ENST00000511782 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
CAST-236ENST00000511782 PRM1P04553 51 aa2.27□□□□□ -2.05
CAST-236ENST00000511782 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CAST-236ENST00000511782 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CAST-236ENST00000511782 MT3P25713 68 aa2.19□□□□□ -2.06
CAST-236ENST00000511782 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
CAST-236ENST00000511782 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
CAST-236ENST00000511782 MT4P47944 62 aa2.05□□□□□ -2.08
CAST-236ENST00000511782 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
CAST-236ENST00000511782 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
CAST-236ENST00000511782 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
CAST-236ENST00000511782 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
CAST-236ENST00000511782 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
CAST-236ENST00000511782 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
CAST-236ENST00000511782 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
CAST-236ENST00000511782 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
CAST-236ENST00000511782 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
CAST-236ENST00000511782 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CAST-236ENST00000511782 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
CAST-236ENST00000511782 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CAST-236ENST00000511782 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
CAST-236ENST00000511782 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CAST-236ENST00000511782 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
CAST-236ENST00000511782 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
CAST-236ENST00000511782 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 125.3 ms