RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
NR1I3-228ENST00000511676 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
NR1I3-228ENST00000511676 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
NR1I3-228ENST00000511676 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
NR1I3-228ENST00000511676 MT1XP80297 61 aa3.76□□□□□ -1.81
NR1I3-228ENST00000511676 NEBP20929 6669 aa3.76□□□□□ -1.81
NR1I3-228ENST00000511676 TNP1P09430 55 aa3.74□□□□□ -1.81
NR1I3-228ENST00000511676 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
NR1I3-228ENST00000511676 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
NR1I3-228ENST00000511676 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
NR1I3-228ENST00000511676 SPRR2EP22531 72 aa3.64□□□□□ -1.83
NR1I3-228ENST00000511676 SPRR2BP35325 72 aa3.64□□□□□ -1.83
NR1I3-228ENST00000511676 SPRR2AP35326 72 aa3.64□□□□□ -1.83
NR1I3-228ENST00000511676 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
NR1I3-228ENST00000511676 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
NR1I3-228ENST00000511676 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
NR1I3-228ENST00000511676 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
NR1I3-228ENST00000511676 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
NR1I3-228ENST00000511676 KMT2DO14686 5537 aa3.59□□□□□ -1.83
NR1I3-228ENST00000511676 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
NR1I3-228ENST00000511676 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
NR1I3-228ENST00000511676 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
NR1I3-228ENST00000511676 SPRR2DP22532 72 aa3.54□□□□□ -1.84
NR1I3-228ENST00000511676 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
NR1I3-228ENST00000511676 MT3P25713 68 aa3.42□□□□□ -1.86
NR1I3-228ENST00000511676 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
NR1I3-228ENST00000511676 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
NR1I3-228ENST00000511676 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
NR1I3-228ENST00000511676 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
NR1I3-228ENST00000511676 MT1EP04732 61 aa3.31□□□□□ -1.88
NR1I3-228ENST00000511676 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
NR1I3-228ENST00000511676 MT1LQ93083 61 aa3.24□□□□□ -1.89
NR1I3-228ENST00000511676 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NR1I3-228ENST00000511676 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
NR1I3-228ENST00000511676 MT1GP13640 62 aa3.2□□□□□ -1.9
NR1I3-228ENST00000511676 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
NR1I3-228ENST00000511676 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
NR1I3-228ENST00000511676 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
NR1I3-228ENST00000511676 MT1MQ8N339 61 aa3.11□□□□□ -1.91
NR1I3-228ENST00000511676 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
NR1I3-228ENST00000511676 MT4P47944 62 aa3.04□□□□□ -1.92
NR1I3-228ENST00000511676 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
NR1I3-228ENST00000511676 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
NR1I3-228ENST00000511676 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
NR1I3-228ENST00000511676 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
NR1I3-228ENST00000511676 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
NR1I3-228ENST00000511676 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
NR1I3-228ENST00000511676 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
NR1I3-228ENST00000511676 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
NR1I3-228ENST00000511676 MT1AP04731 61 aa2.78□□□□□ -1.96
NR1I3-228ENST00000511676 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
NR1I3-228ENST00000511676 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
NR1I3-228ENST00000511676 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
NR1I3-228ENST00000511676 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
NR1I3-228ENST00000511676 INE1O15225 51 aa2.51□□□□□ -2.01
NR1I3-228ENST00000511676 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
NR1I3-228ENST00000511676 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
NR1I3-228ENST00000511676 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
NR1I3-228ENST00000511676 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
NR1I3-228ENST00000511676 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
NR1I3-228ENST00000511676 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
NR1I3-228ENST00000511676 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
NR1I3-228ENST00000511676 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
NR1I3-228ENST00000511676 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
NR1I3-228ENST00000511676 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
NR1I3-228ENST00000511676 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
NR1I3-228ENST00000511676 PRM1P04553 51 aa1.96□□□□□ -2.1
NR1I3-228ENST00000511676 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NR1I3-228ENST00000511676 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
NR1I3-228ENST00000511676 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
NR1I3-228ENST00000511676 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NR1I3-228ENST00000511676 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 98.9 ms