RNA–Protein interactions for RNA: ENST00000511572.5

APBB2-222, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 4

Gene APBB2, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-222	ENST00000511572	LCE5A	Q5TCM9	118 aa		6.72	□□□□□ -1.33
APBB2-222	ENST00000511572	KRTAP19-3	Q7Z4W3	81 aa		6.71	□□□□□ -1.34
APBB2-222	ENST00000511572	DST	Q03001	7570 aa	Known RBP	6.7	□□□□□ -1.34
APBB2-222	ENST00000511572	KRTAP19-5	Q3LI72	72 aa		6.67	□□□□□ -1.34
APBB2-222	ENST00000511572	TNP1	P09430	55 aa		6.65	□□□□□ -1.34
APBB2-222	ENST00000511572	LCE3A	Q5TA76	89 aa		6.58	□□□□□ -1.36
APBB2-222	ENST00000511572	MT1G	P13640	62 aa		6.55	□□□□□ -1.36
APBB2-222	ENST00000511572		A6NED7	52 aa		6.54	□□□□□ -1.36
APBB2-222	ENST00000511572		K7ERS5	55 aa		6.51	□□□□□ -1.37
APBB2-222	ENST00000511572	MT1L	Q93083	61 aa		6.5	□□□□□ -1.37
APBB2-222	ENST00000511572	PP632	Q6XCG6	107 aa		6.48	□□□□□ -1.37
APBB2-222	ENST00000511572	MT1M	Q8N339	61 aa		6.45	□□□□□ -1.38
APBB2-222	ENST00000511572	KRTAP25-1	Q3LHN0	102 aa		6.42	□□□□□ -1.38
APBB2-222	ENST00000511572	LOC100996750	A0A140TA64	210 aa		6.39	□□□□□ -1.39
APBB2-222	ENST00000511572	KRTAP4-6	Q9BYQ5	205 aa		6.39	□□□□□ -1.39
APBB2-222	ENST00000511572	KRTAP15-1	Q3LI76	137 aa		6.33	□□□□□ -1.4
APBB2-222	ENST00000511572	CDC42SE1	Q9NRR8	79 aa		6.33	□□□□□ -1.4
APBB2-222	ENST00000511572	KRTAP12-3	P60328	96 aa		6.32	□□□□□ -1.4
APBB2-222	ENST00000511572	KRTAP4-3	Q9BYR4	195 aa		6.27	□□□□□ -1.41
APBB2-222	ENST00000511572	KRTAP4-9	Q9BYQ8	210 aa		6.26	□□□□□ -1.41
APBB2-222	ENST00000511572	KRTAP4-12	Q9BQ66	201 aa		6.25	□□□□□ -1.41
APBB2-222	ENST00000511572	LCE4A	Q5TA78	99 aa		6.22	□□□□□ -1.41
APBB2-222	ENST00000511572	HMCN1	Q96RW7	5635 aa		6.22	□□□□□ -1.41
APBB2-222	ENST00000511572	ROMO1	P60602	79 aa		6.19	□□□□□ -1.42
APBB2-222	ENST00000511572	GPR98	Q8WXG9	6306 aa		6.17	□□□□□ -1.42
APBB2-222	ENST00000511572	LCE1D	Q5T752	114 aa		6.16	□□□□□ -1.42
APBB2-222	ENST00000511572	KRTAP4-7	Q9BYR0	210 aa		6.15	□□□□□ -1.42
APBB2-222	ENST00000511572	KRTAP5-4	Q6L8H1	288 aa		6.12	□□□□□ -1.43
APBB2-222	ENST00000511572	KRTAP9-4	Q9BYQ2	154 aa		6.11	□□□□□ -1.43
APBB2-222	ENST00000511572	MT4	P47944	62 aa		6.07	□□□□□ -1.44
APBB2-222	ENST00000511572	KRTAP9-9	Q9BYP9	154 aa		6.05	□□□□□ -1.44
APBB2-222	ENST00000511572	AHNAK2	Q8IVF2	5795 aa		5.96	□□□□□ -1.46
APBB2-222	ENST00000511572	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.94	□□□□□ -1.46
APBB2-222	ENST00000511572	BRK1	Q8WUW1	75 aa		5.89	□□□□□ -1.47
APBB2-222	ENST00000511572	PRAC1	Q96KF2	57 aa		5.87	□□□□□ -1.47
APBB2-222	ENST00000511572	LCE3C	Q5T5A8	94 aa		5.86	□□□□□ -1.47
APBB2-222	ENST00000511572	SYNE1	Q8NF91	8797 aa	Known RBP	5.79	□□□□□ -1.48
APBB2-222	ENST00000511572	KRTAP20-2	Q3LI61	65 aa		5.75	□□□□□ -1.49
APBB2-222	ENST00000511572	SPRR5	A0A1B0GTR4	108 aa		5.74	□□□□□ -1.49
APBB2-222	ENST00000511572	KRTAP12-4	P60329	112 aa		5.71	□□□□□ -1.5
APBB2-222	ENST00000511572	KRTAP5-10	Q6L8G5	202 aa		5.7	□□□□□ -1.5
APBB2-222	ENST00000511572	KRTAP5-3	Q6L8H2	238 aa		5.59	□□□□□ -1.51
APBB2-222	ENST00000511572	KRTAP9-6	A8MVA2	160 aa		5.58	□□□□□ -1.52
APBB2-222	ENST00000511572	PMAIP1	Q13794	54 aa		5.57	□□□□□ -1.52
APBB2-222	ENST00000511572	MT1A	P04731	61 aa		5.53	□□□□□ -1.52
APBB2-222	ENST00000511572	KRTAP6-1	Q3LI64	71 aa		5.48	□□□□□ -1.53
APBB2-222	ENST00000511572	KRTAP5-7	Q6L8G8	165 aa		5.46	□□□□□ -1.54
APBB2-222	ENST00000511572	KRTAP5-2	Q701N4	177 aa		5.39	□□□□□ -1.55
APBB2-222	ENST00000511572	PRO0628	Q9UI54	55 aa		5.37	□□□□□ -1.55
APBB2-222	ENST00000511572	NDUFAF8	A1L188	74 aa		5.35	□□□□□ -1.55
APBB2-222	ENST00000511572	KRTAP4-11	Q9BYQ6	195 aa		5.25	□□□□□ -1.57
APBB2-222	ENST00000511572	KRTAP6-2	Q3LI66	62 aa		5.21	□□□□□ -1.58
APBB2-222	ENST00000511572	OBSCN	Q5VST9	7968 aa		5.1	□□□□□ -1.59
APBB2-222	ENST00000511572	KTN1-AS1	Q86SY8	53 aa		5.07	□□□□□ -1.6
APBB2-222	ENST00000511572	MT3	P25713	68 aa		5.06	□□□□□ -1.6
APBB2-222	ENST00000511572	KRTAP5-8	O75690	187 aa		5.05	□□□□□ -1.6
APBB2-222	ENST00000511572	KRTAP4-2	Q9BYR5	136 aa		5.01	□□□□□ -1.61
APBB2-222	ENST00000511572	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.94	□□□□□ -1.62
APBB2-222	ENST00000511572	MUC5AC	P98088	5654 aa		4.89	□□□□□ -1.63
APBB2-222	ENST00000511572	AHNAK	Q09666	5890 aa	Known RBP	4.88	□□□□□ -1.63
APBB2-222	ENST00000511572	KRTAP5-1	Q6L8H4	278 aa		4.81	□□□□□ -1.64
APBB2-222	ENST00000511572	LCE1E	Q5T753	118 aa		4.63	□□□□□ -1.67
APBB2-222	ENST00000511572	LCE1F	Q5T754	118 aa		4.63	□□□□□ -1.67
APBB2-222	ENST00000511572	LUZP6	Q538Z0	58 aa		4.37	□□□□□ -1.71
APBB2-222	ENST00000511572	LCE1C	Q5T751	118 aa		4.3	□□□□□ -1.72
APBB2-222	ENST00000511572	LCE1B	Q5T7P3	118 aa		4.3	□□□□□ -1.72
APBB2-222	ENST00000511572	LCE3D	Q9BYE3	92 aa		4.26	□□□□□ -1.73
APBB2-222	ENST00000511572	LCE3E	Q5T5B0	92 aa		4.05	□□□□□ -1.76
APBB2-222	ENST00000511572	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.95	□□□□□ -1.78
APBB2-222	ENST00000511572	KRTAP5-11	Q6L8G4	156 aa		3.9	□□□□□ -1.79
APBB2-222	ENST00000511572	KRTAP21-2	Q3LI59	83 aa		3.62	□□□□□ -1.83
APBB2-222	ENST00000511572	PHGR1	C9JFL3	82 aa		3.35	□□□□□ -1.87
APBB2-222	ENST00000511572	KRTAP4-4	Q9BYR3	166 aa		3.26	□□□□□ -1.89
APBB2-222	ENST00000511572	PRM1	P04553	51 aa		3.19	□□□□□ -1.9
APBB2-222	ENST00000511572	MUC19	Q7Z5P9	8384 aa		3.13	□□□□□ -1.91
APBB2-222	ENST00000511572	INE1	O15225	51 aa		3.12	□□□□□ -1.91
APBB2-222	ENST00000511572	KRTAP21-1	Q3LI58	79 aa		2.5	□□□□□ -2.01
APBB2-222	ENST00000511572	MUC16	Q8WXI7	14507 aa		2.2	□□□□□ -2.06

Retrieved 78 of 20,778 RNA–protein pairs in 185.3 ms