RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 KRTAP12-1P59990 96 aa2□□□□□ -2.09
UBE2D3-230ENST00000510599 CRIPTQ9P021 101 aa2□□□□□ -2.09
UBE2D3-230ENST00000510599 R4GN34 69 aa2□□□□□ -2.09
UBE2D3-230ENST00000510599 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
UBE2D3-230ENST00000510599 KRTAP25-1Q3LHN0 102 aa1.98□□□□□ -2.09
UBE2D3-230ENST00000510599 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
UBE2D3-230ENST00000510599 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
UBE2D3-230ENST00000510599 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
UBE2D3-230ENST00000510599 MT1HP80294 61 aa1.92□□□□□ -2.1
UBE2D3-230ENST00000510599 MUC2Q02817 5179 aa1.92□□□□□ -2.1
UBE2D3-230ENST00000510599 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.11
UBE2D3-230ENST00000510599 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
UBE2D3-230ENST00000510599 M0R2T5 61 aa1.89□□□□□ -2.11
UBE2D3-230ENST00000510599 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
UBE2D3-230ENST00000510599 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
UBE2D3-230ENST00000510599 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
UBE2D3-230ENST00000510599 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
UBE2D3-230ENST00000510599 MT2AP02795 61 aa1.87□□□□□ -2.11
UBE2D3-230ENST00000510599 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
UBE2D3-230ENST00000510599 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
UBE2D3-230ENST00000510599 MT1FP04733 61 aa1.85□□□□□ -2.11
UBE2D3-230ENST00000510599 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
UBE2D3-230ENST00000510599 TNP1P09430 55 aa1.83□□□□□ -2.12
UBE2D3-230ENST00000510599 MT1BP07438 61 aa1.78□□□□□ -2.12
UBE2D3-230ENST00000510599 MT1XP80297 61 aa1.75□□□□□ -2.13
UBE2D3-230ENST00000510599 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
UBE2D3-230ENST00000510599 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
UBE2D3-230ENST00000510599 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
UBE2D3-230ENST00000510599 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
UBE2D3-230ENST00000510599 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
UBE2D3-230ENST00000510599 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
UBE2D3-230ENST00000510599 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
UBE2D3-230ENST00000510599 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
UBE2D3-230ENST00000510599 USH2AO75445 5202 aa1.61□□□□□ -2.15
UBE2D3-230ENST00000510599 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
UBE2D3-230ENST00000510599 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
UBE2D3-230ENST00000510599 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
UBE2D3-230ENST00000510599 MT1EP04732 61 aa1.53□□□□□ -2.16
UBE2D3-230ENST00000510599 MT1LQ93083 61 aa1.51□□□□□ -2.17
UBE2D3-230ENST00000510599 KMT2DO14686 5537 aa1.51□□□□□ -2.17
UBE2D3-230ENST00000510599 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
UBE2D3-230ENST00000510599 MT1GP13640 62 aa1.47□□□□□ -2.17
UBE2D3-230ENST00000510599 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
UBE2D3-230ENST00000510599 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
UBE2D3-230ENST00000510599 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
UBE2D3-230ENST00000510599 MT1MQ8N339 61 aa1.43□□□□□ -2.18
UBE2D3-230ENST00000510599 INE1O15225 51 aa1.42□□□□□ -2.18
UBE2D3-230ENST00000510599 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
UBE2D3-230ENST00000510599 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
UBE2D3-230ENST00000510599 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
UBE2D3-230ENST00000510599 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
UBE2D3-230ENST00000510599 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
UBE2D3-230ENST00000510599 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
UBE2D3-230ENST00000510599 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
UBE2D3-230ENST00000510599 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
UBE2D3-230ENST00000510599 SPRR2EP22531 72 aa1.32□□□□□ -2.2
UBE2D3-230ENST00000510599 SPRR2BP35325 72 aa1.32□□□□□ -2.2
UBE2D3-230ENST00000510599 SPRR2AP35326 72 aa1.32□□□□□ -2.2
UBE2D3-230ENST00000510599 MT1AP04731 61 aa1.29□□□□□ -2.2
UBE2D3-230ENST00000510599 SPRR2DP22532 72 aa1.27□□□□□ -2.21
UBE2D3-230ENST00000510599 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
UBE2D3-230ENST00000510599 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
UBE2D3-230ENST00000510599 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
UBE2D3-230ENST00000510599 NEBP20929 6669 aa1.22□□□□□ -2.21
UBE2D3-230ENST00000510599 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
UBE2D3-230ENST00000510599 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
UBE2D3-230ENST00000510599 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
UBE2D3-230ENST00000510599 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
UBE2D3-230ENST00000510599 MT4P47944 62 aa1.08□□□□□ -2.24
UBE2D3-230ENST00000510599 PRM1P04553 51 aa1.04□□□□□ -2.24
UBE2D3-230ENST00000510599 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
UBE2D3-230ENST00000510599 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
UBE2D3-230ENST00000510599 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
UBE2D3-230ENST00000510599 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
UBE2D3-230ENST00000510599 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
UBE2D3-230ENST00000510599 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
UBE2D3-230ENST00000510599 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
UBE2D3-230ENST00000510599 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms