RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TRIO-214ENST00000509967 SPRR2DP22532 72 aa3.04□□□□□ -1.92
TRIO-214ENST00000509967 USH2AO75445 5202 aa3.04□□□□□ -1.92
TRIO-214ENST00000509967 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
TRIO-214ENST00000509967 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
TRIO-214ENST00000509967 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
TRIO-214ENST00000509967 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
TRIO-214ENST00000509967 MT1MQ8N339 61 aa2.92□□□□□ -1.94
TRIO-214ENST00000509967 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
TRIO-214ENST00000509967 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
TRIO-214ENST00000509967 KMT2DO14686 5537 aa2.89□□□□□ -1.95
TRIO-214ENST00000509967 MT3P25713 68 aa2.89□□□□□ -1.95
TRIO-214ENST00000509967 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
TRIO-214ENST00000509967 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
TRIO-214ENST00000509967 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
TRIO-214ENST00000509967 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
TRIO-214ENST00000509967 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
TRIO-214ENST00000509967 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
TRIO-214ENST00000509967 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
TRIO-214ENST00000509967 MT1AP04731 61 aa2.81□□□□□ -1.96
TRIO-214ENST00000509967 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
TRIO-214ENST00000509967 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
TRIO-214ENST00000509967 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
TRIO-214ENST00000509967 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
TRIO-214ENST00000509967 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
TRIO-214ENST00000509967 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
TRIO-214ENST00000509967 PRM1P04553 51 aa2.69□□□□□ -1.98
TRIO-214ENST00000509967 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
TRIO-214ENST00000509967 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
TRIO-214ENST00000509967 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
TRIO-214ENST00000509967 MT4P47944 62 aa2.64□□□□□ -1.99
TRIO-214ENST00000509967 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
TRIO-214ENST00000509967 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
TRIO-214ENST00000509967 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
TRIO-214ENST00000509967 LCE5AQ5TCM9 118 aa2.59□□□□□ -2
TRIO-214ENST00000509967 LCE4AQ5TA78 99 aa2.56□□□□□ -2
TRIO-214ENST00000509967 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
TRIO-214ENST00000509967 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
TRIO-214ENST00000509967 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
TRIO-214ENST00000509967 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
TRIO-214ENST00000509967 LCE1DQ5T752 114 aa2.48□□□□□ -2.01
TRIO-214ENST00000509967 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
TRIO-214ENST00000509967 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
TRIO-214ENST00000509967 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
TRIO-214ENST00000509967 NEBP20929 6669 aa2.41□□□□□ -2.02
TRIO-214ENST00000509967 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
TRIO-214ENST00000509967 LCE1EQ5T753 118 aa2.28□□□□□ -2.05
TRIO-214ENST00000509967 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
TRIO-214ENST00000509967 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
TRIO-214ENST00000509967 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
TRIO-214ENST00000509967 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
TRIO-214ENST00000509967 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.07
TRIO-214ENST00000509967 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
TRIO-214ENST00000509967 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
TRIO-214ENST00000509967 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
TRIO-214ENST00000509967 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
TRIO-214ENST00000509967 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
TRIO-214ENST00000509967 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
TRIO-214ENST00000509967 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
TRIO-214ENST00000509967 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
TRIO-214ENST00000509967 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
TRIO-214ENST00000509967 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
TRIO-214ENST00000509967 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
TRIO-214ENST00000509967 KRTAP4-12Q9BQ66 201 aa1.7□□□□□ -2.14
TRIO-214ENST00000509967 KRTAP4-2Q9BYR5 136 aa1.7□□□□□ -2.14
TRIO-214ENST00000509967 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
TRIO-214ENST00000509967 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
TRIO-214ENST00000509967 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
TRIO-214ENST00000509967 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
TRIO-214ENST00000509967 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
TRIO-214ENST00000509967 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
TRIO-214ENST00000509967 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
TRIO-214ENST00000509967 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
TRIO-214ENST00000509967 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
TRIO-214ENST00000509967 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.18
TRIO-214ENST00000509967 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
TRIO-214ENST00000509967 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 115 ms