RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MT2AP02795 61 aa2.32□□□□□ -2.04
NEK1-204ENST00000509912 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
NEK1-204ENST00000509912 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
NEK1-204ENST00000509912 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
NEK1-204ENST00000509912 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
NEK1-204ENST00000509912 USH2AO75445 5202 aa2.3□□□□□ -2.04
NEK1-204ENST00000509912 MT1FP04733 61 aa2.29□□□□□ -2.04
NEK1-204ENST00000509912 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
NEK1-204ENST00000509912 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
NEK1-204ENST00000509912 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
NEK1-204ENST00000509912 SPRR2GQ9BYE4 73 aa2.27□□□□□ -2.05
NEK1-204ENST00000509912 PRO2289Q9P1D8 64 aa2.26□□□□□ -2.05
NEK1-204ENST00000509912 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
NEK1-204ENST00000509912 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
NEK1-204ENST00000509912 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
NEK1-204ENST00000509912 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
NEK1-204ENST00000509912 KRTAP20-1Q3LI63 56 aa2.14□□□□□ -2.07
NEK1-204ENST00000509912 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
NEK1-204ENST00000509912 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
NEK1-204ENST00000509912 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
NEK1-204ENST00000509912 MT1BP07438 61 aa2.13□□□□□ -2.07
NEK1-204ENST00000509912 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
NEK1-204ENST00000509912 NEBP20929 6669 aa2.12□□□□□ -2.07
NEK1-204ENST00000509912 S4R3F8 94 aa2.11□□□□□ -2.07
NEK1-204ENST00000509912 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
NEK1-204ENST00000509912 LCE3AQ5TA76 89 aa2.1□□□□□ -2.07
NEK1-204ENST00000509912 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
NEK1-204ENST00000509912 A0A0D9SG42 100 aa2.08□□□□□ -2.08
NEK1-204ENST00000509912 INE1O15225 51 aa2.06□□□□□ -2.08
NEK1-204ENST00000509912 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
NEK1-204ENST00000509912 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
NEK1-204ENST00000509912 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
NEK1-204ENST00000509912 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
NEK1-204ENST00000509912 KRTAP12-3P60328 96 aa2□□□□□ -2.09
NEK1-204ENST00000509912 SPRR2EP22531 72 aa2□□□□□ -2.09
NEK1-204ENST00000509912 SPRR2BP35325 72 aa2□□□□□ -2.09
NEK1-204ENST00000509912 SPRR2AP35326 72 aa2□□□□□ -2.09
NEK1-204ENST00000509912 M0QZ58 72 aa1.99□□□□□ -2.09
NEK1-204ENST00000509912 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
NEK1-204ENST00000509912 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
NEK1-204ENST00000509912 MT1XP80297 61 aa1.97□□□□□ -2.09
NEK1-204ENST00000509912 KMT2DO14686 5537 aa1.94□□□□□ -2.1
NEK1-204ENST00000509912 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
NEK1-204ENST00000509912 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
NEK1-204ENST00000509912 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
NEK1-204ENST00000509912 SPRR2DP22532 72 aa1.93□□□□□ -2.1
NEK1-204ENST00000509912 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
NEK1-204ENST00000509912 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
NEK1-204ENST00000509912 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
NEK1-204ENST00000509912 MT1GP13640 62 aa1.82□□□□□ -2.12
NEK1-204ENST00000509912 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
NEK1-204ENST00000509912 MT1EP04732 61 aa1.79□□□□□ -2.12
NEK1-204ENST00000509912 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
NEK1-204ENST00000509912 TNP1P09430 55 aa1.75□□□□□ -2.13
NEK1-204ENST00000509912 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
NEK1-204ENST00000509912 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
NEK1-204ENST00000509912 MT1MQ8N339 61 aa1.71□□□□□ -2.14
NEK1-204ENST00000509912 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
NEK1-204ENST00000509912 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
NEK1-204ENST00000509912 MT1LQ93083 61 aa1.69□□□□□ -2.14
NEK1-204ENST00000509912 MT4P47944 62 aa1.68□□□□□ -2.14
NEK1-204ENST00000509912 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
NEK1-204ENST00000509912 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.14
NEK1-204ENST00000509912 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
NEK1-204ENST00000509912 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
NEK1-204ENST00000509912 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
NEK1-204ENST00000509912 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
NEK1-204ENST00000509912 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
NEK1-204ENST00000509912 MT1AP04731 61 aa1.53□□□□□ -2.17
NEK1-204ENST00000509912 SYNE1Q8NF91 8797 aaKnown RBP1.41□□□□□ -2.18
NEK1-204ENST00000509912 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
NEK1-204ENST00000509912 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
NEK1-204ENST00000509912 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
NEK1-204ENST00000509912 PRM1P04553 51 aa1.31□□□□□ -2.2
NEK1-204ENST00000509912 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
NEK1-204ENST00000509912 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
NEK1-204ENST00000509912 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
NEK1-204ENST00000509912 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 84.8 ms