RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH7Q8WXX0 4024 aa0.12□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH1Q9P2D7 4330 aa0.12□□□□□ -2.39
XRCC4-204ENST00000509268 MYO15AQ9UKN7 3530 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 GOLGB1Q14789 3259 aaKnown RBP0.11□□□□□ -2.39
XRCC4-204ENST00000509268 H3BNG1 76 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 M0QY20 66 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 LINC01590Q5TEZ4 76 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 CDH23Q9H251 3354 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 TRRAPQ9Y4A5 3859 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 VPS13CQ709C8 3753 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH9Q9NYC9 4486 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 C9orf92A6NGG3 77 aa0.11□□□□□ -2.39
XRCC4-204ENST00000509268 KRTAP19-5Q3LI72 72 aa0.1□□□□□ -2.39
XRCC4-204ENST00000509268 NOP10Q9NPE3 64 aaKnown RBP0.1□□□□□ -2.39
XRCC4-204ENST00000509268 TOMM7Q9P0U1 55 aa0.1□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH10Q8IVF4 4471 aa0.1□□□□□ -2.39
XRCC4-204ENST00000509268 LRP2P98164 4655 aa0.09□□□□□ -2.39
XRCC4-204ENST00000509268 M0QZ58 72 aa0.09□□□□□ -2.4
XRCC4-204ENST00000509268 SMR3BP02814 79 aaPredicted RBP0.09□□□□□ -2.4
XRCC4-204ENST00000509268 KRTAP8-1Q8IUC2 63 aa0.09□□□□□ -2.4
XRCC4-204ENST00000509268 UTRNP46939 3433 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 MT1AP04731 61 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 TNP1P09430 55 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 DEFB110Q30KQ9 67 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 DNAH14Q0VDD8 3507 aa0.08□□□□□ -2.4
XRCC4-204ENST00000509268 PRCDQ00LT1 54 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 SPRR2FQ96RM1 72 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 DNAH17Q9UFH2 4485 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 CMYA5Q8N3K9 4069 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 STARD9Q9P2P6 4700 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 WDFY3Q8IZQ1 3526 aa0.06□□□□□ -2.4
XRCC4-204ENST00000509268 MUC17Q685J3 4493 aa0.05□□□□□ -2.4
XRCC4-204ENST00000509268 PLECQ15149 4684 aaKnown RBP0.05□□□□□ -2.4
XRCC4-204ENST00000509268 SPART-AS1P0CW21 52 aa0.05□□□□□ -2.4
XRCC4-204ENST00000509268 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
XRCC4-204ENST00000509268 K7EIM0 57 aa0.04□□□□□ -2.4
XRCC4-204ENST00000509268 KRTAP20-2Q3LI61 65 aa0.04□□□□□ -2.4
XRCC4-204ENST00000509268 DYNC1H1Q14204 4646 aaKnown RBP0.03□□□□□ -2.4
XRCC4-204ENST00000509268 DEFB1P60022 68 aa0.03□□□□□ -2.4
XRCC4-204ENST00000509268 A0A096LNI7 61 aa0.02□□□□□ -2.41
XRCC4-204ENST00000509268 RPL39P5Q59GN2 51 aa0.02□□□□□ -2.41
XRCC4-204ENST00000509268 TMEM167AQ8TBQ9 72 aa0.02□□□□□ -2.41
XRCC4-204ENST00000509268 DNAH5Q8TE73 4624 aa0.01□□□□□ -2.41
XRCC4-204ENST00000509268 DEFB108AA8MXU0 73 aa0.01□□□□□ -2.41
XRCC4-204ENST00000509268 DEFB136Q30KP8 78 aa0.01□□□□□ -2.41
XRCC4-204ENST00000509268 APELAP0DMC3 54 aa0□□□□□ -2.41
XRCC4-204ENST00000509268 MT1EP04732 61 aa-0.01□□□□□ -2.41
XRCC4-204ENST00000509268 MT1HP80294 61 aa-0.01□□□□□ -2.41
XRCC4-204ENST00000509268 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
XRCC4-204ENST00000509268 MT1LQ93083 61 aa-0.02□□□□□ -2.41
XRCC4-204ENST00000509268 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
XRCC4-204ENST00000509268 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
XRCC4-204ENST00000509268 MT1GP13640 62 aa-0.03□□□□□ -2.41
XRCC4-204ENST00000509268 MT1XP80297 61 aa-0.03□□□□□ -2.41
XRCC4-204ENST00000509268 DEFB4AO15263 64 aa-0.04□□□□□ -2.42
XRCC4-204ENST00000509268 HTN1P15515 57 aa-0.04□□□□□ -2.42
XRCC4-204ENST00000509268 DEFB124Q8NES8 71 aa-0.04□□□□□ -2.42
XRCC4-204ENST00000509268 RHPN1-AS1Q9BWJ2 59 aa-0.04□□□□□ -2.42
XRCC4-204ENST00000509268 H3BUX3 64 aa-0.06□□□□□ -2.42
XRCC4-204ENST00000509268 A0A096LPF7 62 aa-0.06□□□□□ -2.42
XRCC4-204ENST00000509268 DEFB133Q30KQ1 61 aa-0.07□□□□□ -2.42
XRCC4-204ENST00000509268 STATHP02808 62 aa-0.08□□□□□ -2.42
XRCC4-204ENST00000509268 MT1MQ8N339 61 aa-0.09□□□□□ -2.42
XRCC4-204ENST00000509268 MT2AP02795 61 aa-0.1□□□□□ -2.42
XRCC4-204ENST00000509268 LINC01556Q5JQF7 62 aa-0.1□□□□□ -2.42
XRCC4-204ENST00000509268 MT1BP07438 61 aa-0.11□□□□□ -2.43
XRCC4-204ENST00000509268 RPS29P62273 56 aaKnown RBP-0.11□□□□□ -2.43
XRCC4-204ENST00000509268 KRTAP19-2Q3LHN2 52 aa-0.11□□□□□ -2.43
XRCC4-204ENST00000509268 DEFB108BQ8NET1 73 aa-0.12□□□□□ -2.43
XRCC4-204ENST00000509268 MT1HL1P0DM35 61 aa-0.14□□□□□ -2.43
XRCC4-204ENST00000509268 HTN3P15516 51 aa-0.16□□□□□ -2.44
XRCC4-204ENST00000509268 CD52P31358 61 aa-0.16□□□□□ -2.44
XRCC4-204ENST00000509268 COX14Q96I36 57 aa-0.16□□□□□ -2.44
XRCC4-204ENST00000509268 MT1FP04733 61 aa-0.17□□□□□ -2.44
XRCC4-204ENST00000509268 Q9Y3F1 56 aa-0.22□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 73.9 ms