RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 MT1EP04732 61 aa4.5□□□□□ -1.69
CAST-223ENST00000508608 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CAST-223ENST00000508608 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
CAST-223ENST00000508608 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
CAST-223ENST00000508608 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
CAST-223ENST00000508608 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
CAST-223ENST00000508608 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
CAST-223ENST00000508608 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CAST-223ENST00000508608 MT1GP13640 62 aa4.21□□□□□ -1.74
CAST-223ENST00000508608 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
CAST-223ENST00000508608 MT1MQ8N339 61 aa4.2□□□□□ -1.74
CAST-223ENST00000508608 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
CAST-223ENST00000508608 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
CAST-223ENST00000508608 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
CAST-223ENST00000508608 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
CAST-223ENST00000508608 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
CAST-223ENST00000508608 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
CAST-223ENST00000508608 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CAST-223ENST00000508608 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
CAST-223ENST00000508608 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
CAST-223ENST00000508608 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CAST-223ENST00000508608 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
CAST-223ENST00000508608 MT1AP04731 61 aa3.86□□□□□ -1.79
CAST-223ENST00000508608 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
CAST-223ENST00000508608 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
CAST-223ENST00000508608 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
CAST-223ENST00000508608 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
CAST-223ENST00000508608 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
CAST-223ENST00000508608 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CAST-223ENST00000508608 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
CAST-223ENST00000508608 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
CAST-223ENST00000508608 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
CAST-223ENST00000508608 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CAST-223ENST00000508608 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
CAST-223ENST00000508608 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
CAST-223ENST00000508608 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
CAST-223ENST00000508608 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
CAST-223ENST00000508608 SPRR2EP22531 72 aa3.62□□□□□ -1.83
CAST-223ENST00000508608 SPRR2BP35325 72 aa3.62□□□□□ -1.83
CAST-223ENST00000508608 SPRR2AP35326 72 aa3.62□□□□□ -1.83
CAST-223ENST00000508608 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
CAST-223ENST00000508608 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
CAST-223ENST00000508608 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
CAST-223ENST00000508608 PRM1P04553 51 aa3.53□□□□□ -1.84
CAST-223ENST00000508608 NEBP20929 6669 aa3.47□□□□□ -1.85
CAST-223ENST00000508608 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CAST-223ENST00000508608 MT3P25713 68 aa3.43□□□□□ -1.86
CAST-223ENST00000508608 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
CAST-223ENST00000508608 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CAST-223ENST00000508608 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
CAST-223ENST00000508608 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
CAST-223ENST00000508608 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
CAST-223ENST00000508608 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CAST-223ENST00000508608 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
CAST-223ENST00000508608 MT4P47944 62 aa3.02□□□□□ -1.93
CAST-223ENST00000508608 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
CAST-223ENST00000508608 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
CAST-223ENST00000508608 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CAST-223ENST00000508608 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
CAST-223ENST00000508608 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
CAST-223ENST00000508608 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
CAST-223ENST00000508608 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
CAST-223ENST00000508608 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
CAST-223ENST00000508608 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
CAST-223ENST00000508608 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
CAST-223ENST00000508608 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
CAST-223ENST00000508608 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CAST-223ENST00000508608 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
CAST-223ENST00000508608 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CAST-223ENST00000508608 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
CAST-223ENST00000508608 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
CAST-223ENST00000508608 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CAST-223ENST00000508608 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CAST-223ENST00000508608 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CAST-223ENST00000508608 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CAST-223ENST00000508608 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CAST-223ENST00000508608 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 69.4 ms