RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
LMNA-222ENST00000508500 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
LMNA-222ENST00000508500 MT1EP04732 61 aa6.06□□□□□ -1.44
LMNA-222ENST00000508500 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
LMNA-222ENST00000508500 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
LMNA-222ENST00000508500 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
LMNA-222ENST00000508500 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
LMNA-222ENST00000508500 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
LMNA-222ENST00000508500 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
LMNA-222ENST00000508500 TNP1P09430 55 aa5.98□□□□□ -1.45
LMNA-222ENST00000508500 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
LMNA-222ENST00000508500 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
LMNA-222ENST00000508500 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
LMNA-222ENST00000508500 MT1GP13640 62 aa5.85□□□□□ -1.47
LMNA-222ENST00000508500 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
LMNA-222ENST00000508500 MT1MQ8N339 61 aa5.78□□□□□ -1.48
LMNA-222ENST00000508500 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
LMNA-222ENST00000508500 MT1LQ93083 61 aa5.77□□□□□ -1.49
LMNA-222ENST00000508500 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
LMNA-222ENST00000508500 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
LMNA-222ENST00000508500 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
LMNA-222ENST00000508500 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
LMNA-222ENST00000508500 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
LMNA-222ENST00000508500 MT4P47944 62 aa5.69□□□□□ -1.5
LMNA-222ENST00000508500 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
LMNA-222ENST00000508500 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
LMNA-222ENST00000508500 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
LMNA-222ENST00000508500 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
LMNA-222ENST00000508500 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
LMNA-222ENST00000508500 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
LMNA-222ENST00000508500 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
LMNA-222ENST00000508500 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
LMNA-222ENST00000508500 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
LMNA-222ENST00000508500 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
LMNA-222ENST00000508500 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
LMNA-222ENST00000508500 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
LMNA-222ENST00000508500 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
LMNA-222ENST00000508500 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
LMNA-222ENST00000508500 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
LMNA-222ENST00000508500 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
LMNA-222ENST00000508500 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
LMNA-222ENST00000508500 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
LMNA-222ENST00000508500 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
LMNA-222ENST00000508500 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
LMNA-222ENST00000508500 MT1AP04731 61 aa4.9□□□□□ -1.63
LMNA-222ENST00000508500 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
LMNA-222ENST00000508500 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
LMNA-222ENST00000508500 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
LMNA-222ENST00000508500 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
LMNA-222ENST00000508500 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
LMNA-222ENST00000508500 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
LMNA-222ENST00000508500 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
LMNA-222ENST00000508500 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
LMNA-222ENST00000508500 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
LMNA-222ENST00000508500 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
LMNA-222ENST00000508500 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
LMNA-222ENST00000508500 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
LMNA-222ENST00000508500 MT3P25713 68 aa4.45□□□□□ -1.7
LMNA-222ENST00000508500 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
LMNA-222ENST00000508500 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
LMNA-222ENST00000508500 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
LMNA-222ENST00000508500 INE1O15225 51 aa3.94□□□□□ -1.78
LMNA-222ENST00000508500 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
LMNA-222ENST00000508500 H3BS24 57 aa3.85□□□□□ -1.79
LMNA-222ENST00000508500 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
LMNA-222ENST00000508500 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
LMNA-222ENST00000508500 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
LMNA-222ENST00000508500 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
LMNA-222ENST00000508500 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
LMNA-222ENST00000508500 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
LMNA-222ENST00000508500 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
LMNA-222ENST00000508500 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
LMNA-222ENST00000508500 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
LMNA-222ENST00000508500 PRM1P04553 51 aa3.15□□□□□ -1.91
LMNA-222ENST00000508500 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
LMNA-222ENST00000508500 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
LMNA-222ENST00000508500 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
LMNA-222ENST00000508500 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 47.5 ms