RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 SPRR2AP35326 72 aa3.43□□□□□ -1.86
TRIO-209ENST00000507714 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
TRIO-209ENST00000507714 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
TRIO-209ENST00000507714 KMT2DO14686 5537 aa3.4□□□□□ -1.86
TRIO-209ENST00000507714 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
TRIO-209ENST00000507714 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
TRIO-209ENST00000507714 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
TRIO-209ENST00000507714 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
TRIO-209ENST00000507714 H3BS24 57 aa3.34□□□□□ -1.87
TRIO-209ENST00000507714 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
TRIO-209ENST00000507714 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
TRIO-209ENST00000507714 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
TRIO-209ENST00000507714 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
TRIO-209ENST00000507714 NEBP20929 6669 aa3.31□□□□□ -1.88
TRIO-209ENST00000507714 SPRR2DP22532 72 aa3.31□□□□□ -1.88
TRIO-209ENST00000507714 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
TRIO-209ENST00000507714 MT1EP04732 61 aa3.3□□□□□ -1.88
TRIO-209ENST00000507714 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
TRIO-209ENST00000507714 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
TRIO-209ENST00000507714 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
TRIO-209ENST00000507714 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
TRIO-209ENST00000507714 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
TRIO-209ENST00000507714 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
TRIO-209ENST00000507714 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
TRIO-209ENST00000507714 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
TRIO-209ENST00000507714 MT1GP13640 62 aa3.22□□□□□ -1.89
TRIO-209ENST00000507714 MT1LQ93083 61 aa3.2□□□□□ -1.9
TRIO-209ENST00000507714 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
TRIO-209ENST00000507714 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
TRIO-209ENST00000507714 SVIPQ8NHG7 77 aa3.14□□□□□ -1.91
TRIO-209ENST00000507714 MT1MQ8N339 61 aa3.13□□□□□ -1.91
TRIO-209ENST00000507714 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
TRIO-209ENST00000507714 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
TRIO-209ENST00000507714 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
TRIO-209ENST00000507714 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
TRIO-209ENST00000507714 MT4P47944 62 aa2.87□□□□□ -1.95
TRIO-209ENST00000507714 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
TRIO-209ENST00000507714 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
TRIO-209ENST00000507714 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
TRIO-209ENST00000507714 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
TRIO-209ENST00000507714 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
TRIO-209ENST00000507714 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
TRIO-209ENST00000507714 MT1AP04731 61 aa2.76□□□□□ -1.97
TRIO-209ENST00000507714 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
TRIO-209ENST00000507714 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
TRIO-209ENST00000507714 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
TRIO-209ENST00000507714 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
TRIO-209ENST00000507714 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
TRIO-209ENST00000507714 MT3P25713 68 aa2.54□□□□□ -2
TRIO-209ENST00000507714 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
TRIO-209ENST00000507714 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
TRIO-209ENST00000507714 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
TRIO-209ENST00000507714 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
TRIO-209ENST00000507714 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
TRIO-209ENST00000507714 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
TRIO-209ENST00000507714 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
TRIO-209ENST00000507714 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
TRIO-209ENST00000507714 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
TRIO-209ENST00000507714 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TRIO-209ENST00000507714 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
TRIO-209ENST00000507714 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
TRIO-209ENST00000507714 A0A0A0MQY5 61 aa2.24□□□□□ -2.05
TRIO-209ENST00000507714 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
TRIO-209ENST00000507714 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
TRIO-209ENST00000507714 INE1O15225 51 aa2.12□□□□□ -2.07
TRIO-209ENST00000507714 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
TRIO-209ENST00000507714 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
TRIO-209ENST00000507714 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
TRIO-209ENST00000507714 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
TRIO-209ENST00000507714 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
TRIO-209ENST00000507714 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
TRIO-209ENST00000507714 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
TRIO-209ENST00000507714 PRM1P04553 51 aa1.83□□□□□ -2.12
TRIO-209ENST00000507714 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
TRIO-209ENST00000507714 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
TRIO-209ENST00000507714 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
TRIO-209ENST00000507714 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
TRIO-209ENST00000507714 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 23.1 ms