RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SPRR2AP35326 72 aa3.8□□□□□ -1.8
TPM3-218ENST00000505010 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
TPM3-218ENST00000505010 TNP1P09430 55 aa3.78□□□□□ -1.8
TPM3-218ENST00000505010 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
TPM3-218ENST00000505010 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
TPM3-218ENST00000505010 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
TPM3-218ENST00000505010 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
TPM3-218ENST00000505010 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
TPM3-218ENST00000505010 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
TPM3-218ENST00000505010 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
TPM3-218ENST00000505010 SPRR2DP22532 72 aa3.68□□□□□ -1.82
TPM3-218ENST00000505010 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
TPM3-218ENST00000505010 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
TPM3-218ENST00000505010 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
TPM3-218ENST00000505010 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
TPM3-218ENST00000505010 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
TPM3-218ENST00000505010 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
TPM3-218ENST00000505010 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
TPM3-218ENST00000505010 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
TPM3-218ENST00000505010 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
TPM3-218ENST00000505010 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
TPM3-218ENST00000505010 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
TPM3-218ENST00000505010 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
TPM3-218ENST00000505010 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
TPM3-218ENST00000505010 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
TPM3-218ENST00000505010 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
TPM3-218ENST00000505010 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
TPM3-218ENST00000505010 MT1EP04732 61 aa3.41□□□□□ -1.86
TPM3-218ENST00000505010 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
TPM3-218ENST00000505010 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
TPM3-218ENST00000505010 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
TPM3-218ENST00000505010 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
TPM3-218ENST00000505010 MT1LQ93083 61 aa3.33□□□□□ -1.88
TPM3-218ENST00000505010 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
TPM3-218ENST00000505010 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
TPM3-218ENST00000505010 MT4P47944 62 aa3.26□□□□□ -1.89
TPM3-218ENST00000505010 MT1GP13640 62 aa3.24□□□□□ -1.89
TPM3-218ENST00000505010 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
TPM3-218ENST00000505010 MT1MQ8N339 61 aa3.23□□□□□ -1.89
TPM3-218ENST00000505010 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
TPM3-218ENST00000505010 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
TPM3-218ENST00000505010 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
TPM3-218ENST00000505010 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
TPM3-218ENST00000505010 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
TPM3-218ENST00000505010 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
TPM3-218ENST00000505010 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
TPM3-218ENST00000505010 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
TPM3-218ENST00000505010 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
TPM3-218ENST00000505010 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TPM3-218ENST00000505010 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
TPM3-218ENST00000505010 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
TPM3-218ENST00000505010 MT1AP04731 61 aa2.84□□□□□ -1.95
TPM3-218ENST00000505010 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
TPM3-218ENST00000505010 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
TPM3-218ENST00000505010 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
TPM3-218ENST00000505010 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
TPM3-218ENST00000505010 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
TPM3-218ENST00000505010 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
TPM3-218ENST00000505010 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
TPM3-218ENST00000505010 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
TPM3-218ENST00000505010 MT3P25713 68 aa2.56□□□□□ -2
TPM3-218ENST00000505010 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
TPM3-218ENST00000505010 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
TPM3-218ENST00000505010 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
TPM3-218ENST00000505010 INE1O15225 51 aa2.38□□□□□ -2.03
TPM3-218ENST00000505010 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
TPM3-218ENST00000505010 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
TPM3-218ENST00000505010 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
TPM3-218ENST00000505010 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
TPM3-218ENST00000505010 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
TPM3-218ENST00000505010 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
TPM3-218ENST00000505010 PRM1P04553 51 aa2.03□□□□□ -2.08
TPM3-218ENST00000505010 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
TPM3-218ENST00000505010 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
TPM3-218ENST00000505010 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TPM3-218ENST00000505010 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
TPM3-218ENST00000505010 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TPM3-218ENST00000505010 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 121.3 ms