RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
MATR3-210ENST00000504643 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
MATR3-210ENST00000504643 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
MATR3-210ENST00000504643 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
MATR3-210ENST00000504643 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
MATR3-210ENST00000504643 SPANXA2-OT1Q8N9U9 137 aa2.94□□□□□ -1.94
MATR3-210ENST00000504643 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
MATR3-210ENST00000504643 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
MATR3-210ENST00000504643 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
MATR3-210ENST00000504643 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
MATR3-210ENST00000504643 MT1EP04732 61 aa2.9□□□□□ -1.95
MATR3-210ENST00000504643 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
MATR3-210ENST00000504643 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
MATR3-210ENST00000504643 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
MATR3-210ENST00000504643 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
MATR3-210ENST00000504643 MT1GP13640 62 aa2.88□□□□□ -1.95
MATR3-210ENST00000504643 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
MATR3-210ENST00000504643 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
MATR3-210ENST00000504643 COA5Q86WW8 74 aa2.86□□□□□ -1.95
MATR3-210ENST00000504643 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
MATR3-210ENST00000504643 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
MATR3-210ENST00000504643 A0A0D9SG42 100 aa2.85□□□□□ -1.95
MATR3-210ENST00000504643 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
MATR3-210ENST00000504643 UQCR11O14957 56 aa2.84□□□□□ -1.96
MATR3-210ENST00000504643 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.96
MATR3-210ENST00000504643 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
MATR3-210ENST00000504643 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
MATR3-210ENST00000504643 A0A1B0GU33 70 aa2.81□□□□□ -1.96
MATR3-210ENST00000504643 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
MATR3-210ENST00000504643 MT1MQ8N339 61 aa2.76□□□□□ -1.97
MATR3-210ENST00000504643 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
MATR3-210ENST00000504643 MT4P47944 62 aa2.75□□□□□ -1.97
MATR3-210ENST00000504643 MT1LQ93083 61 aa2.75□□□□□ -1.97
MATR3-210ENST00000504643 TNP1P09430 55 aa2.74□□□□□ -1.97
MATR3-210ENST00000504643 A0A1B0GU69 56 aa2.73□□□□□ -1.97
MATR3-210ENST00000504643 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
MATR3-210ENST00000504643 C10orf95Q9H7T3 257 aa2.71□□□□□ -1.98
MATR3-210ENST00000504643 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
MATR3-210ENST00000504643 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
MATR3-210ENST00000504643 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
MATR3-210ENST00000504643 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
MATR3-210ENST00000504643 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
MATR3-210ENST00000504643 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
MATR3-210ENST00000504643 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
MATR3-210ENST00000504643 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
MATR3-210ENST00000504643 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
MATR3-210ENST00000504643 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
MATR3-210ENST00000504643 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
MATR3-210ENST00000504643 INE1O15225 51 aa2.46□□□□□ -2.02
MATR3-210ENST00000504643 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
MATR3-210ENST00000504643 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
MATR3-210ENST00000504643 MT1AP04731 61 aa2.36□□□□□ -2.03
MATR3-210ENST00000504643 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
MATR3-210ENST00000504643 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
MATR3-210ENST00000504643 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
MATR3-210ENST00000504643 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
MATR3-210ENST00000504643 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
MATR3-210ENST00000504643 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
MATR3-210ENST00000504643 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
MATR3-210ENST00000504643 MT3P25713 68 aa2.2□□□□□ -2.06
MATR3-210ENST00000504643 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
MATR3-210ENST00000504643 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
MATR3-210ENST00000504643 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
MATR3-210ENST00000504643 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
MATR3-210ENST00000504643 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
MATR3-210ENST00000504643 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
MATR3-210ENST00000504643 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
MATR3-210ENST00000504643 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
MATR3-210ENST00000504643 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
MATR3-210ENST00000504643 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
MATR3-210ENST00000504643 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
MATR3-210ENST00000504643 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
MATR3-210ENST00000504643 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
MATR3-210ENST00000504643 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
MATR3-210ENST00000504643 PRM1P04553 51 aa1.38□□□□□ -2.19
MATR3-210ENST00000504643 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
MATR3-210ENST00000504643 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
MATR3-210ENST00000504643 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms