RNA–Protein interactions for RNA: ENST00000504350.1

COPG1-202, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-202ENST00000504350 SYNE2Q8WXH0 6885 aaKnown RBP2.43□□□□□ -2.02
COPG1-202ENST00000504350 MT1HP80294 61 aa2.43□□□□□ -2.02
COPG1-202ENST00000504350 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
COPG1-202ENST00000504350 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
COPG1-202ENST00000504350 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
COPG1-202ENST00000504350 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
COPG1-202ENST00000504350 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
COPG1-202ENST00000504350 MT1XP80297 61 aa2.31□□□□□ -2.04
COPG1-202ENST00000504350 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
COPG1-202ENST00000504350 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
COPG1-202ENST00000504350 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
COPG1-202ENST00000504350 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
COPG1-202ENST00000504350 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.05
COPG1-202ENST00000504350 MT1BP07438 61 aa2.27□□□□□ -2.05
COPG1-202ENST00000504350 NEBP20929 6669 aa2.26□□□□□ -2.05
COPG1-202ENST00000504350 M0R2T5 61 aa2.25□□□□□ -2.05
COPG1-202ENST00000504350 MT2AP02795 61 aa2.25□□□□□ -2.05
COPG1-202ENST00000504350 MT1FP04733 61 aa2.25□□□□□ -2.05
COPG1-202ENST00000504350 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
COPG1-202ENST00000504350 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
COPG1-202ENST00000504350 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
COPG1-202ENST00000504350 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
COPG1-202ENST00000504350 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
COPG1-202ENST00000504350 MT3P25713 68 aa2.2□□□□□ -2.06
COPG1-202ENST00000504350 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
COPG1-202ENST00000504350 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
COPG1-202ENST00000504350 KMT2DO14686 5537 aa2.12□□□□□ -2.07
COPG1-202ENST00000504350 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
COPG1-202ENST00000504350 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
COPG1-202ENST00000504350 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
COPG1-202ENST00000504350 MT1LQ93083 61 aa2.04□□□□□ -2.08
COPG1-202ENST00000504350 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
COPG1-202ENST00000504350 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
COPG1-202ENST00000504350 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
COPG1-202ENST00000504350 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
COPG1-202ENST00000504350 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
COPG1-202ENST00000504350 MT1EP04732 61 aa2□□□□□ -2.09
COPG1-202ENST00000504350 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
COPG1-202ENST00000504350 SPRR2EP22531 72 aa1.97□□□□□ -2.09
COPG1-202ENST00000504350 SPRR2BP35325 72 aa1.97□□□□□ -2.09
COPG1-202ENST00000504350 SPRR2AP35326 72 aa1.97□□□□□ -2.09
COPG1-202ENST00000504350 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
COPG1-202ENST00000504350 MT1AP04731 61 aa1.89□□□□□ -2.11
COPG1-202ENST00000504350 SPRR2DP22532 72 aa1.89□□□□□ -2.11
COPG1-202ENST00000504350 PRM1P04553 51 aa1.86□□□□□ -2.11
COPG1-202ENST00000504350 MT1GP13640 62 aa1.86□□□□□ -2.11
COPG1-202ENST00000504350 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
COPG1-202ENST00000504350 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
COPG1-202ENST00000504350 MT1MQ8N339 61 aa1.85□□□□□ -2.11
COPG1-202ENST00000504350 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
COPG1-202ENST00000504350 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
COPG1-202ENST00000504350 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
COPG1-202ENST00000504350 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
COPG1-202ENST00000504350 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
COPG1-202ENST00000504350 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
COPG1-202ENST00000504350 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
COPG1-202ENST00000504350 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
COPG1-202ENST00000504350 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
COPG1-202ENST00000504350 MT4P47944 62 aa1.74□□□□□ -2.13
COPG1-202ENST00000504350 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
COPG1-202ENST00000504350 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
COPG1-202ENST00000504350 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
COPG1-202ENST00000504350 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
COPG1-202ENST00000504350 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
COPG1-202ENST00000504350 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
COPG1-202ENST00000504350 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
COPG1-202ENST00000504350 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
COPG1-202ENST00000504350 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
COPG1-202ENST00000504350 OBSCNQ5VST9 7968 aa1.5□□□□□ -2.17
COPG1-202ENST00000504350 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
COPG1-202ENST00000504350 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
COPG1-202ENST00000504350 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
COPG1-202ENST00000504350 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
COPG1-202ENST00000504350 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
COPG1-202ENST00000504350 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
COPG1-202ENST00000504350 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
COPG1-202ENST00000504350 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
COPG1-202ENST00000504350 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms