RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
SMTN-221ENST00000504335 LCE2BO14633 110 aa4.24□□□□□ -1.73
SMTN-221ENST00000504335 MT1LQ93083 61 aa4.21□□□□□ -1.74
SMTN-221ENST00000504335 PRM1P04553 51 aa4.19□□□□□ -1.74
SMTN-221ENST00000504335 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
SMTN-221ENST00000504335 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
SMTN-221ENST00000504335 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SMTN-221ENST00000504335 MT1EP04732 61 aa4.16□□□□□ -1.74
SMTN-221ENST00000504335 KMT2DO14686 5537 aa4.15□□□□□ -1.74
SMTN-221ENST00000504335 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
SMTN-221ENST00000504335 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
SMTN-221ENST00000504335 MT1AP04731 61 aa4.06□□□□□ -1.76
SMTN-221ENST00000504335 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
SMTN-221ENST00000504335 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
SMTN-221ENST00000504335 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
SMTN-221ENST00000504335 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
SMTN-221ENST00000504335 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
SMTN-221ENST00000504335 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
SMTN-221ENST00000504335 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
SMTN-221ENST00000504335 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
SMTN-221ENST00000504335 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
SMTN-221ENST00000504335 MT1GP13640 62 aa3.97□□□□□ -1.77
SMTN-221ENST00000504335 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
SMTN-221ENST00000504335 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
SMTN-221ENST00000504335 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
SMTN-221ENST00000504335 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SMTN-221ENST00000504335 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
SMTN-221ENST00000504335 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
SMTN-221ENST00000504335 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
SMTN-221ENST00000504335 MT1MQ8N339 61 aa3.74□□□□□ -1.81
SMTN-221ENST00000504335 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
SMTN-221ENST00000504335 NEBP20929 6669 aa3.65□□□□□ -1.82
SMTN-221ENST00000504335 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
SMTN-221ENST00000504335 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SMTN-221ENST00000504335 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
SMTN-221ENST00000504335 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
SMTN-221ENST00000504335 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
SMTN-221ENST00000504335 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
SMTN-221ENST00000504335 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
SMTN-221ENST00000504335 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
SMTN-221ENST00000504335 SPRR2AP35326 72 aa3.47□□□□□ -1.85
SMTN-221ENST00000504335 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SMTN-221ENST00000504335 SPRR2EP22531 72 aa3.4□□□□□ -1.87
SMTN-221ENST00000504335 SPRR2BP35325 72 aa3.4□□□□□ -1.87
SMTN-221ENST00000504335 SPRR2DP22532 72 aa3.32□□□□□ -1.88
SMTN-221ENST00000504335 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
SMTN-221ENST00000504335 MT3P25713 68 aa3.14□□□□□ -1.91
SMTN-221ENST00000504335 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SMTN-221ENST00000504335 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
SMTN-221ENST00000504335 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
SMTN-221ENST00000504335 MT4P47944 62 aa2.92□□□□□ -1.94
SMTN-221ENST00000504335 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
SMTN-221ENST00000504335 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
SMTN-221ENST00000504335 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
SMTN-221ENST00000504335 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
SMTN-221ENST00000504335 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SMTN-221ENST00000504335 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SMTN-221ENST00000504335 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
SMTN-221ENST00000504335 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SMTN-221ENST00000504335 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SMTN-221ENST00000504335 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
SMTN-221ENST00000504335 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SMTN-221ENST00000504335 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
SMTN-221ENST00000504335 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
SMTN-221ENST00000504335 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SMTN-221ENST00000504335 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
SMTN-221ENST00000504335 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
SMTN-221ENST00000504335 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SMTN-221ENST00000504335 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
SMTN-221ENST00000504335 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SMTN-221ENST00000504335 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SMTN-221ENST00000504335 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
SMTN-221ENST00000504335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SMTN-221ENST00000504335 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
SMTN-221ENST00000504335 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
SMTN-221ENST00000504335 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
SMTN-221ENST00000504335 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SMTN-221ENST00000504335 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms