RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
LINC00958-201ENST00000504230 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
LINC00958-201ENST00000504230 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
LINC00958-201ENST00000504230 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
LINC00958-201ENST00000504230 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
LINC00958-201ENST00000504230 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
LINC00958-201ENST00000504230 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
LINC00958-201ENST00000504230 TNP1P09430 55 aa4.31□□□□□ -1.72
LINC00958-201ENST00000504230 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
LINC00958-201ENST00000504230 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
LINC00958-201ENST00000504230 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
LINC00958-201ENST00000504230 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
LINC00958-201ENST00000504230 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
LINC00958-201ENST00000504230 KMT2DO14686 5537 aa4.25□□□□□ -1.73
LINC00958-201ENST00000504230 ROMO1P60602 79 aa4.24□□□□□ -1.73
LINC00958-201ENST00000504230 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
LINC00958-201ENST00000504230 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
LINC00958-201ENST00000504230 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
LINC00958-201ENST00000504230 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
LINC00958-201ENST00000504230 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
LINC00958-201ENST00000504230 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
LINC00958-201ENST00000504230 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
LINC00958-201ENST00000504230 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
LINC00958-201ENST00000504230 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
LINC00958-201ENST00000504230 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
LINC00958-201ENST00000504230 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
LINC00958-201ENST00000504230 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
LINC00958-201ENST00000504230 MT1EP04732 61 aa4.02□□□□□ -1.77
LINC00958-201ENST00000504230 KRTAP12-3P60328 96 aa4□□□□□ -1.77
LINC00958-201ENST00000504230 SPRR2EP22531 72 aa3.99□□□□□ -1.77
LINC00958-201ENST00000504230 SPRR2BP35325 72 aa3.99□□□□□ -1.77
LINC00958-201ENST00000504230 SPRR2AP35326 72 aa3.99□□□□□ -1.77
LINC00958-201ENST00000504230 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
LINC00958-201ENST00000504230 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
LINC00958-201ENST00000504230 NEBP20929 6669 aa3.95□□□□□ -1.78
LINC00958-201ENST00000504230 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
LINC00958-201ENST00000504230 MT1LQ93083 61 aa3.89□□□□□ -1.79
LINC00958-201ENST00000504230 MT1GP13640 62 aa3.87□□□□□ -1.79
LINC00958-201ENST00000504230 SPRR2DP22532 72 aa3.85□□□□□ -1.79
LINC00958-201ENST00000504230 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
LINC00958-201ENST00000504230 MT1MQ8N339 61 aa3.8□□□□□ -1.8
LINC00958-201ENST00000504230 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
LINC00958-201ENST00000504230 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
LINC00958-201ENST00000504230 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
LINC00958-201ENST00000504230 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
LINC00958-201ENST00000504230 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.82
LINC00958-201ENST00000504230 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
LINC00958-201ENST00000504230 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
LINC00958-201ENST00000504230 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
LINC00958-201ENST00000504230 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
LINC00958-201ENST00000504230 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
LINC00958-201ENST00000504230 MT4P47944 62 aa3.34□□□□□ -1.88
LINC00958-201ENST00000504230 MT1AP04731 61 aa3.33□□□□□ -1.88
LINC00958-201ENST00000504230 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
LINC00958-201ENST00000504230 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
LINC00958-201ENST00000504230 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
LINC00958-201ENST00000504230 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
LINC00958-201ENST00000504230 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
LINC00958-201ENST00000504230 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
LINC00958-201ENST00000504230 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
LINC00958-201ENST00000504230 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
LINC00958-201ENST00000504230 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
LINC00958-201ENST00000504230 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
LINC00958-201ENST00000504230 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
LINC00958-201ENST00000504230 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
LINC00958-201ENST00000504230 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
LINC00958-201ENST00000504230 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
LINC00958-201ENST00000504230 INE1O15225 51 aa2.85□□□□□ -1.95
LINC00958-201ENST00000504230 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
LINC00958-201ENST00000504230 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
LINC00958-201ENST00000504230 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
LINC00958-201ENST00000504230 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
LINC00958-201ENST00000504230 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
LINC00958-201ENST00000504230 PRM1P04553 51 aa2.18□□□□□ -2.06
LINC00958-201ENST00000504230 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
LINC00958-201ENST00000504230 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
LINC00958-201ENST00000504230 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 15.3 ms