RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
SCLT1-205ENST00000503401 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
SCLT1-205ENST00000503401 SPRR2EP22531 72 aa6.28□□□□□ -1.4
SCLT1-205ENST00000503401 SPRR2BP35325 72 aa6.28□□□□□ -1.4
SCLT1-205ENST00000503401 SPRR2AP35326 72 aa6.28□□□□□ -1.4
SCLT1-205ENST00000503401 ROMO1P60602 79 aa6.28□□□□□ -1.4
SCLT1-205ENST00000503401 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SCLT1-205ENST00000503401 TNP1P09430 55 aa6.24□□□□□ -1.41
SCLT1-205ENST00000503401 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
SCLT1-205ENST00000503401 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
SCLT1-205ENST00000503401 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
SCLT1-205ENST00000503401 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
SCLT1-205ENST00000503401 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
SCLT1-205ENST00000503401 MT1EP04732 61 aa6.1□□□□□ -1.43
SCLT1-205ENST00000503401 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
SCLT1-205ENST00000503401 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
SCLT1-205ENST00000503401 SPRR2DP22532 72 aa6.06□□□□□ -1.44
SCLT1-205ENST00000503401 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
SCLT1-205ENST00000503401 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
SCLT1-205ENST00000503401 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
SCLT1-205ENST00000503401 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
SCLT1-205ENST00000503401 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
SCLT1-205ENST00000503401 MT1LQ93083 61 aa5.89□□□□□ -1.47
SCLT1-205ENST00000503401 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
SCLT1-205ENST00000503401 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
SCLT1-205ENST00000503401 MT1GP13640 62 aa5.86□□□□□ -1.47
SCLT1-205ENST00000503401 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SCLT1-205ENST00000503401 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
SCLT1-205ENST00000503401 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
SCLT1-205ENST00000503401 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
SCLT1-205ENST00000503401 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
SCLT1-205ENST00000503401 MT1MQ8N339 61 aa5.79□□□□□ -1.48
SCLT1-205ENST00000503401 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
SCLT1-205ENST00000503401 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
SCLT1-205ENST00000503401 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SCLT1-205ENST00000503401 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
SCLT1-205ENST00000503401 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
SCLT1-205ENST00000503401 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
SCLT1-205ENST00000503401 MT4P47944 62 aa5.3□□□□□ -1.56
SCLT1-205ENST00000503401 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
SCLT1-205ENST00000503401 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SCLT1-205ENST00000503401 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
SCLT1-205ENST00000503401 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
SCLT1-205ENST00000503401 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
SCLT1-205ENST00000503401 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SCLT1-205ENST00000503401 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
SCLT1-205ENST00000503401 MT1AP04731 61 aa5□□□□□ -1.61
SCLT1-205ENST00000503401 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
SCLT1-205ENST00000503401 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
SCLT1-205ENST00000503401 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
SCLT1-205ENST00000503401 INE1O15225 51 aa4.9□□□□□ -1.63
SCLT1-205ENST00000503401 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
SCLT1-205ENST00000503401 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
SCLT1-205ENST00000503401 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
SCLT1-205ENST00000503401 MT3P25713 68 aa4.54□□□□□ -1.68
SCLT1-205ENST00000503401 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
SCLT1-205ENST00000503401 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
SCLT1-205ENST00000503401 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
SCLT1-205ENST00000503401 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
SCLT1-205ENST00000503401 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
SCLT1-205ENST00000503401 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
SCLT1-205ENST00000503401 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SCLT1-205ENST00000503401 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
SCLT1-205ENST00000503401 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SCLT1-205ENST00000503401 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
SCLT1-205ENST00000503401 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SCLT1-205ENST00000503401 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
SCLT1-205ENST00000503401 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
SCLT1-205ENST00000503401 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
SCLT1-205ENST00000503401 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
SCLT1-205ENST00000503401 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SCLT1-205ENST00000503401 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
SCLT1-205ENST00000503401 PRM1P04553 51 aa3.21□□□□□ -1.9
SCLT1-205ENST00000503401 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SCLT1-205ENST00000503401 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SCLT1-205ENST00000503401 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SCLT1-205ENST00000503401 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 128.8 ms