RNA–Protein interactions for RNA: ENST00000503396.5

PDS5A-202, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 1 (best) BASIC

Gene PDS5A, Length 2,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-202ENST00000503396 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
PDS5A-202ENST00000503396 MT1LQ93083 61 aa7.54□□□□□ -1.2
PDS5A-202ENST00000503396 MT1EP04732 61 aa7.46□□□□□ -1.22
PDS5A-202ENST00000503396 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
PDS5A-202ENST00000503396 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
PDS5A-202ENST00000503396 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
PDS5A-202ENST00000503396 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
PDS5A-202ENST00000503396 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
PDS5A-202ENST00000503396 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
PDS5A-202ENST00000503396 KRTAP12-4P60329 112 aa7.09□□□□□ -1.27
PDS5A-202ENST00000503396 MT1GP13640 62 aa7.08□□□□□ -1.28
PDS5A-202ENST00000503396 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
PDS5A-202ENST00000503396 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.29
PDS5A-202ENST00000503396 MT1MQ8N339 61 aa6.94□□□□□ -1.3
PDS5A-202ENST00000503396 MDN1Q9NU22 5596 aa6.86□□□□□ -1.31
PDS5A-202ENST00000503396 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
PDS5A-202ENST00000503396 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
PDS5A-202ENST00000503396 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
PDS5A-202ENST00000503396 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
PDS5A-202ENST00000503396 LCE5AQ5TCM9 118 aa6.71□□□□□ -1.34
PDS5A-202ENST00000503396 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
PDS5A-202ENST00000503396 LCE1AQ5T7P2 110 aa6.65□□□□□ -1.34
PDS5A-202ENST00000503396 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
PDS5A-202ENST00000503396 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
PDS5A-202ENST00000503396 MT1AP04731 61 aa6.57□□□□□ -1.36
PDS5A-202ENST00000503396 SPRR2EP22531 72 aa6.57□□□□□ -1.36
PDS5A-202ENST00000503396 SPRR2BP35325 72 aa6.57□□□□□ -1.36
PDS5A-202ENST00000503396 SPRR2AP35326 72 aa6.57□□□□□ -1.36
PDS5A-202ENST00000503396 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
PDS5A-202ENST00000503396 KRTAP6-1Q3LI64 71 aa6.42□□□□□ -1.38
PDS5A-202ENST00000503396 LCE3DQ9BYE3 92 aa6.42□□□□□ -1.38
PDS5A-202ENST00000503396 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
PDS5A-202ENST00000503396 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
PDS5A-202ENST00000503396 LCE3EQ5T5B0 92 aa6.38□□□□□ -1.39
PDS5A-202ENST00000503396 PRM1P04553 51 aa6.33□□□□□ -1.4
PDS5A-202ENST00000503396 SPRR2DP22532 72 aa6.31□□□□□ -1.4
PDS5A-202ENST00000503396 NEBP20929 6669 aa6.28□□□□□ -1.4
PDS5A-202ENST00000503396 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.45
PDS5A-202ENST00000503396 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
PDS5A-202ENST00000503396 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
PDS5A-202ENST00000503396 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
PDS5A-202ENST00000503396 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
PDS5A-202ENST00000503396 MT3P25713 68 aa5.61□□□□□ -1.51
PDS5A-202ENST00000503396 MT4P47944 62 aa5.58□□□□□ -1.52
PDS5A-202ENST00000503396 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
PDS5A-202ENST00000503396 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
PDS5A-202ENST00000503396 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
PDS5A-202ENST00000503396 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
PDS5A-202ENST00000503396 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
PDS5A-202ENST00000503396 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
PDS5A-202ENST00000503396 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
PDS5A-202ENST00000503396 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
PDS5A-202ENST00000503396 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
PDS5A-202ENST00000503396 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
PDS5A-202ENST00000503396 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
PDS5A-202ENST00000503396 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
PDS5A-202ENST00000503396 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
PDS5A-202ENST00000503396 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
PDS5A-202ENST00000503396 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
PDS5A-202ENST00000503396 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
PDS5A-202ENST00000503396 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
PDS5A-202ENST00000503396 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
PDS5A-202ENST00000503396 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.71
PDS5A-202ENST00000503396 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
PDS5A-202ENST00000503396 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
PDS5A-202ENST00000503396 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
PDS5A-202ENST00000503396 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
PDS5A-202ENST00000503396 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
PDS5A-202ENST00000503396 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
PDS5A-202ENST00000503396 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
PDS5A-202ENST00000503396 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
PDS5A-202ENST00000503396 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
PDS5A-202ENST00000503396 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
PDS5A-202ENST00000503396 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PDS5A-202ENST00000503396 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
PDS5A-202ENST00000503396 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
PDS5A-202ENST00000503396 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms