RNA–Protein interactions for RNA: ENST00000503337.1

ABCC3-205, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best)

Gene ABCC3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-205ENST00000503337 MT1LQ93083 61 aa4.83□□□□□ -1.64
ABCC3-205ENST00000503337 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
ABCC3-205ENST00000503337 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
ABCC3-205ENST00000503337 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
ABCC3-205ENST00000503337 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
ABCC3-205ENST00000503337 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
ABCC3-205ENST00000503337 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
ABCC3-205ENST00000503337 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
ABCC3-205ENST00000503337 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
ABCC3-205ENST00000503337 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
ABCC3-205ENST00000503337 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
ABCC3-205ENST00000503337 MT1GP13640 62 aa4.55□□□□□ -1.68
ABCC3-205ENST00000503337 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
ABCC3-205ENST00000503337 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
ABCC3-205ENST00000503337 MT1MQ8N339 61 aa4.52□□□□□ -1.69
ABCC3-205ENST00000503337 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
ABCC3-205ENST00000503337 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
ABCC3-205ENST00000503337 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
ABCC3-205ENST00000503337 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
ABCC3-205ENST00000503337 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
ABCC3-205ENST00000503337 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
ABCC3-205ENST00000503337 SPRR2EP22531 72 aa4.38□□□□□ -1.71
ABCC3-205ENST00000503337 SPRR2BP35325 72 aa4.38□□□□□ -1.71
ABCC3-205ENST00000503337 SPRR2AP35326 72 aa4.38□□□□□ -1.71
ABCC3-205ENST00000503337 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
ABCC3-205ENST00000503337 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
ABCC3-205ENST00000503337 NEBP20929 6669 aa4.24□□□□□ -1.73
ABCC3-205ENST00000503337 SPRR2DP22532 72 aa4.22□□□□□ -1.73
ABCC3-205ENST00000503337 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
ABCC3-205ENST00000503337 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
ABCC3-205ENST00000503337 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
ABCC3-205ENST00000503337 MT1AP04731 61 aa4.1□□□□□ -1.75
ABCC3-205ENST00000503337 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
ABCC3-205ENST00000503337 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
ABCC3-205ENST00000503337 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
ABCC3-205ENST00000503337 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
ABCC3-205ENST00000503337 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
ABCC3-205ENST00000503337 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
ABCC3-205ENST00000503337 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
ABCC3-205ENST00000503337 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
ABCC3-205ENST00000503337 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
ABCC3-205ENST00000503337 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
ABCC3-205ENST00000503337 PRM1P04553 51 aa3.79□□□□□ -1.8
ABCC3-205ENST00000503337 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
ABCC3-205ENST00000503337 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
ABCC3-205ENST00000503337 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
ABCC3-205ENST00000503337 MT3P25713 68 aa3.7□□□□□ -1.82
ABCC3-205ENST00000503337 MT4P47944 62 aa3.68□□□□□ -1.82
ABCC3-205ENST00000503337 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
ABCC3-205ENST00000503337 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
ABCC3-205ENST00000503337 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
ABCC3-205ENST00000503337 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
ABCC3-205ENST00000503337 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
ABCC3-205ENST00000503337 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
ABCC3-205ENST00000503337 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
ABCC3-205ENST00000503337 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
ABCC3-205ENST00000503337 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
ABCC3-205ENST00000503337 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
ABCC3-205ENST00000503337 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
ABCC3-205ENST00000503337 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
ABCC3-205ENST00000503337 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
ABCC3-205ENST00000503337 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
ABCC3-205ENST00000503337 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
ABCC3-205ENST00000503337 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
ABCC3-205ENST00000503337 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
ABCC3-205ENST00000503337 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
ABCC3-205ENST00000503337 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
ABCC3-205ENST00000503337 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
ABCC3-205ENST00000503337 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
ABCC3-205ENST00000503337 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
ABCC3-205ENST00000503337 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
ABCC3-205ENST00000503337 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
ABCC3-205ENST00000503337 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
ABCC3-205ENST00000503337 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
ABCC3-205ENST00000503337 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ABCC3-205ENST00000503337 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
ABCC3-205ENST00000503337 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
ABCC3-205ENST00000503337 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms