RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
LSM3P4-201ENST00000502948 A0A1B0GU33 70 aa2.11□□□□□ -2.07
LSM3P4-201ENST00000502948 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
LSM3P4-201ENST00000502948 COA5Q86WW8 74 aa2.1□□□□□ -2.07
LSM3P4-201ENST00000502948 SERP2Q8N6R1 65 aa2.1□□□□□ -2.07
LSM3P4-201ENST00000502948 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
LSM3P4-201ENST00000502948 K7ERU9 68 aa2.09□□□□□ -2.07
LSM3P4-201ENST00000502948 SPATA8Q6RVD6 105 aa2.09□□□□□ -2.07
LSM3P4-201ENST00000502948 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
LSM3P4-201ENST00000502948 TNP1P09430 55 aa2.08□□□□□ -2.08
LSM3P4-201ENST00000502948 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
LSM3P4-201ENST00000502948 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
LSM3P4-201ENST00000502948 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
LSM3P4-201ENST00000502948 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
LSM3P4-201ENST00000502948 KRTAP4-3Q9BYR4 195 aa2.06□□□□□ -2.08
LSM3P4-201ENST00000502948 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
LSM3P4-201ENST00000502948 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
LSM3P4-201ENST00000502948 PRAC1Q96KF2 57 aa2.02□□□□□ -2.09
LSM3P4-201ENST00000502948 A0A1B0GU69 56 aa2.01□□□□□ -2.09
LSM3P4-201ENST00000502948 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
LSM3P4-201ENST00000502948 H7BZZ5 65 aa2□□□□□ -2.09
LSM3P4-201ENST00000502948 COX7CP15954 63 aa2□□□□□ -2.09
LSM3P4-201ENST00000502948 KRTAP12-4P60329 112 aa2□□□□□ -2.09
LSM3P4-201ENST00000502948 A8MU10 97 aa1.98□□□□□ -2.09
LSM3P4-201ENST00000502948 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
LSM3P4-201ENST00000502948 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
LSM3P4-201ENST00000502948 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
LSM3P4-201ENST00000502948 MT3P25713 68 aa1.91□□□□□ -2.1
LSM3P4-201ENST00000502948 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
LSM3P4-201ENST00000502948 NDUFAF8A1L188 74 aa1.9□□□□□ -2.11
LSM3P4-201ENST00000502948 LINC01558Q9Y6Z2 57 aa1.89□□□□□ -2.11
LSM3P4-201ENST00000502948 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
LSM3P4-201ENST00000502948 UQCR11O14957 56 aa1.87□□□□□ -2.11
LSM3P4-201ENST00000502948 MT1AP04731 61 aa1.86□□□□□ -2.11
LSM3P4-201ENST00000502948 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
LSM3P4-201ENST00000502948 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
LSM3P4-201ENST00000502948 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
LSM3P4-201ENST00000502948 ANAPC13Q9BS18 74 aa1.81□□□□□ -2.12
LSM3P4-201ENST00000502948 K7ERS5 55 aa1.8□□□□□ -2.12
LSM3P4-201ENST00000502948 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
LSM3P4-201ENST00000502948 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
LSM3P4-201ENST00000502948 CCDC179H3BU77 68 aa1.77□□□□□ -2.13
LSM3P4-201ENST00000502948 TMEM258P61165 79 aa1.76□□□□□ -2.13
LSM3P4-201ENST00000502948 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
LSM3P4-201ENST00000502948 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
LSM3P4-201ENST00000502948 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
LSM3P4-201ENST00000502948 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
LSM3P4-201ENST00000502948 V9GYY9 64 aa1.72□□□□□ -2.13
LSM3P4-201ENST00000502948 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
LSM3P4-201ENST00000502948 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
LSM3P4-201ENST00000502948 Q1T7F1 81 aa1.7□□□□□ -2.14
LSM3P4-201ENST00000502948 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
LSM3P4-201ENST00000502948 RPS28P62857 69 aaKnown RBP1.69□□□□□ -2.14
LSM3P4-201ENST00000502948 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
LSM3P4-201ENST00000502948 ROMO1P60602 79 aa1.64□□□□□ -2.15
LSM3P4-201ENST00000502948 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
LSM3P4-201ENST00000502948 PSPHP1O15172 72 aa1.63□□□□□ -2.15
LSM3P4-201ENST00000502948 A6NED7 52 aa1.59□□□□□ -2.15
LSM3P4-201ENST00000502948 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
LSM3P4-201ENST00000502948 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
LSM3P4-201ENST00000502948 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
LSM3P4-201ENST00000502948 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
LSM3P4-201ENST00000502948 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
LSM3P4-201ENST00000502948 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
LSM3P4-201ENST00000502948 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
LSM3P4-201ENST00000502948 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
LSM3P4-201ENST00000502948 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
LSM3P4-201ENST00000502948 LUZP6Q538Z0 58 aa1.2□□□□□ -2.22
LSM3P4-201ENST00000502948 BRK1Q8WUW1 75 aa1.2□□□□□ -2.22
LSM3P4-201ENST00000502948 PMAIP1Q13794 54 aa1.13□□□□□ -2.23
LSM3P4-201ENST00000502948 PRO0628Q9UI54 55 aa1.11□□□□□ -2.23
LSM3P4-201ENST00000502948 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
LSM3P4-201ENST00000502948 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
LSM3P4-201ENST00000502948 KTN1-AS1Q86SY8 53 aa0.93□□□□□ -2.26
LSM3P4-201ENST00000502948 PRM1P04553 51 aa0.8□□□□□ -2.28
LSM3P4-201ENST00000502948 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
LSM3P4-201ENST00000502948 INE1O15225 51 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 91.3 ms