RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
AC055717.1-201ENST00000502221 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
AC055717.1-201ENST00000502221 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
AC055717.1-201ENST00000502221 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
AC055717.1-201ENST00000502221 MT1BP07438 61 aa4.22□□□□□ -1.73
AC055717.1-201ENST00000502221 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
AC055717.1-201ENST00000502221 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
AC055717.1-201ENST00000502221 MT1XP80297 61 aa4.17□□□□□ -1.74
AC055717.1-201ENST00000502221 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
AC055717.1-201ENST00000502221 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
AC055717.1-201ENST00000502221 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
AC055717.1-201ENST00000502221 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
AC055717.1-201ENST00000502221 NEBP20929 6669 aa4.08□□□□□ -1.76
AC055717.1-201ENST00000502221 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
AC055717.1-201ENST00000502221 KRTAP5-9P26371 169 aa4□□□□□ -1.77
AC055717.1-201ENST00000502221 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
AC055717.1-201ENST00000502221 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
AC055717.1-201ENST00000502221 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
AC055717.1-201ENST00000502221 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
AC055717.1-201ENST00000502221 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
AC055717.1-201ENST00000502221 KMT2DO14686 5537 aa3.95□□□□□ -1.78
AC055717.1-201ENST00000502221 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
AC055717.1-201ENST00000502221 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
AC055717.1-201ENST00000502221 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
AC055717.1-201ENST00000502221 SPRR2EP22531 72 aa3.82□□□□□ -1.8
AC055717.1-201ENST00000502221 SPRR2BP35325 72 aa3.82□□□□□ -1.8
AC055717.1-201ENST00000502221 SPRR2AP35326 72 aa3.82□□□□□ -1.8
AC055717.1-201ENST00000502221 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
AC055717.1-201ENST00000502221 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
AC055717.1-201ENST00000502221 SPRR2DP22532 72 aa3.69□□□□□ -1.82
AC055717.1-201ENST00000502221 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
AC055717.1-201ENST00000502221 MT1LQ93083 61 aa3.66□□□□□ -1.82
AC055717.1-201ENST00000502221 MT1EP04732 61 aa3.63□□□□□ -1.83
AC055717.1-201ENST00000502221 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
AC055717.1-201ENST00000502221 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
AC055717.1-201ENST00000502221 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
AC055717.1-201ENST00000502221 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
AC055717.1-201ENST00000502221 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
AC055717.1-201ENST00000502221 MT1GP13640 62 aa3.4□□□□□ -1.86
AC055717.1-201ENST00000502221 MT1AP04731 61 aa3.38□□□□□ -1.87
AC055717.1-201ENST00000502221 MT1MQ8N339 61 aa3.34□□□□□ -1.87
AC055717.1-201ENST00000502221 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
AC055717.1-201ENST00000502221 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
AC055717.1-201ENST00000502221 MT4P47944 62 aa3.26□□□□□ -1.89
AC055717.1-201ENST00000502221 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
AC055717.1-201ENST00000502221 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
AC055717.1-201ENST00000502221 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.89
AC055717.1-201ENST00000502221 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
AC055717.1-201ENST00000502221 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
AC055717.1-201ENST00000502221 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
AC055717.1-201ENST00000502221 PRM1P04553 51 aa3.14□□□□□ -1.91
AC055717.1-201ENST00000502221 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
AC055717.1-201ENST00000502221 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
AC055717.1-201ENST00000502221 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
AC055717.1-201ENST00000502221 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
AC055717.1-201ENST00000502221 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
AC055717.1-201ENST00000502221 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
AC055717.1-201ENST00000502221 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
AC055717.1-201ENST00000502221 MT3P25713 68 aa2.82□□□□□ -1.96
AC055717.1-201ENST00000502221 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
AC055717.1-201ENST00000502221 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
AC055717.1-201ENST00000502221 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
AC055717.1-201ENST00000502221 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
AC055717.1-201ENST00000502221 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
AC055717.1-201ENST00000502221 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
AC055717.1-201ENST00000502221 MUC5ACP98088 5654 aa2.58□□□□□ -2
AC055717.1-201ENST00000502221 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
AC055717.1-201ENST00000502221 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
AC055717.1-201ENST00000502221 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
AC055717.1-201ENST00000502221 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
AC055717.1-201ENST00000502221 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
AC055717.1-201ENST00000502221 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.08
AC055717.1-201ENST00000502221 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
AC055717.1-201ENST00000502221 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
AC055717.1-201ENST00000502221 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
AC055717.1-201ENST00000502221 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
AC055717.1-201ENST00000502221 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 172.6 ms