RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	MT1E	P04732	61 aa		5.45	□□□□□ -1.54
IVD-209	ENST00000497816	LCE5A	Q5TCM9	118 aa		5.43	□□□□□ -1.54
IVD-209	ENST00000497816	ROMO1	P60602	79 aa		5.42	□□□□□ -1.54
IVD-209	ENST00000497816	PMAIP1	Q13794	54 aa		5.4	□□□□□ -1.54
IVD-209	ENST00000497816	KRTAP19-3	Q7Z4W3	81 aa		5.4	□□□□□ -1.54
IVD-209	ENST00000497816		H3BS24	57 aa		5.38	□□□□□ -1.55
IVD-209	ENST00000497816	TNP1	P09430	55 aa		5.34	□□□□□ -1.55
IVD-209	ENST00000497816	KRTAP19-5	Q3LI72	72 aa		5.34	□□□□□ -1.55
IVD-209	ENST00000497816	DST	Q03001	7570 aa	Known RBP	5.33	□□□□□ -1.56
IVD-209	ENST00000497816	KRTAP25-1	Q3LHN0	102 aa		5.33	□□□□□ -1.56
IVD-209	ENST00000497816	MT1G	P13640	62 aa		5.26	□□□□□ -1.57
IVD-209	ENST00000497816	KRTAP23-1	A1A580	65 aa		5.22	□□□□□ -1.57
IVD-209	ENST00000497816	LCE3A	Q5TA76	89 aa		5.21	□□□□□ -1.58
IVD-209	ENST00000497816	MT1L	Q93083	61 aa		5.21	□□□□□ -1.58
IVD-209	ENST00000497816	PP632	Q6XCG6	107 aa		5.2	□□□□□ -1.58
IVD-209	ENST00000497816	MT1M	Q8N339	61 aa		5.18	□□□□□ -1.58
IVD-209	ENST00000497816	KRTAP4-9	Q9BYQ8	210 aa		5.17	□□□□□ -1.58
IVD-209	ENST00000497816	KTN1-AS1	Q86SY8	53 aa		5.13	□□□□□ -1.59
IVD-209	ENST00000497816	KRTAP4-3	Q9BYR4	195 aa		5.07	□□□□□ -1.6
IVD-209	ENST00000497816	LCE1D	Q5T752	114 aa		5.06	□□□□□ -1.6
IVD-209	ENST00000497816	PRAC1	Q96KF2	57 aa		5.06	□□□□□ -1.6
IVD-209	ENST00000497816	LCE4A	Q5TA78	99 aa		5.04	□□□□□ -1.6
IVD-209	ENST00000497816	GPR98	Q8WXG9	6306 aa		5.04	□□□□□ -1.6
IVD-209	ENST00000497816	KRTAP12-3	P60328	96 aa		5	□□□□□ -1.61
IVD-209	ENST00000497816	HMCN1	Q96RW7	5635 aa		4.99	□□□□□ -1.61
IVD-209	ENST00000497816	MT4	P47944	62 aa		4.98	□□□□□ -1.61
IVD-209	ENST00000497816	KRTAP5-4	Q6L8H1	288 aa		4.97	□□□□□ -1.61
IVD-209	ENST00000497816	KRTAP4-7	Q9BYR0	210 aa		4.95	□□□□□ -1.62
IVD-209	ENST00000497816	KRTAP4-6	Q9BYQ5	205 aa		4.86	□□□□□ -1.63
IVD-209	ENST00000497816	AHNAK2	Q8IVF2	5795 aa		4.85	□□□□□ -1.63
IVD-209	ENST00000497816	KRTAP15-1	Q3LI76	137 aa		4.83	□□□□□ -1.64
IVD-209	ENST00000497816	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.78	□□□□□ -1.64
IVD-209	ENST00000497816	KRTAP19-4	Q3LI73	84 aa		4.77	□□□□□ -1.65
IVD-209	ENST00000497816	KRTAP5-10	Q6L8G5	202 aa		4.72	□□□□□ -1.65
IVD-209	ENST00000497816		A0A0A0MQY5	61 aa		4.69	□□□□□ -1.66
IVD-209	ENST00000497816	LOC100996750	A0A140TA64	210 aa		4.69	□□□□□ -1.66
IVD-209	ENST00000497816	KRTAP20-2	Q3LI61	65 aa		4.68	□□□□□ -1.66
IVD-209	ENST00000497816	SPRR5	A0A1B0GTR4	108 aa		4.66	□□□□□ -1.66
IVD-209	ENST00000497816	LCE3C	Q5T5A8	94 aa		4.64	□□□□□ -1.67
IVD-209	ENST00000497816	KRTAP12-4	P60329	112 aa		4.62	□□□□□ -1.67
IVD-209	ENST00000497816	KRTAP5-3	Q6L8H2	238 aa		4.6	□□□□□ -1.67
IVD-209	ENST00000497816	SYNE1	Q8NF91	8797 aa	Known RBP	4.57	□□□□□ -1.68
IVD-209	ENST00000497816	KRTAP5-7	Q6L8G8	165 aa		4.53	□□□□□ -1.68
IVD-209	ENST00000497816	MT1A	P04731	61 aa		4.42	□□□□□ -1.7
IVD-209	ENST00000497816	KRTAP6-1	Q3LI64	71 aa		4.41	□□□□□ -1.7
IVD-209	ENST00000497816	KRTAP9-6	A8MVA2	160 aa		4.39	□□□□□ -1.71
IVD-209	ENST00000497816	KRTAP5-2	Q701N4	177 aa		4.36	□□□□□ -1.71
IVD-209	ENST00000497816	KRTAP9-4	Q9BYQ2	154 aa		4.27	□□□□□ -1.73
IVD-209	ENST00000497816	KRTAP4-11	Q9BYQ6	195 aa		4.27	□□□□□ -1.73
IVD-209	ENST00000497816	KRTAP6-2	Q3LI66	62 aa		4.21	□□□□□ -1.74
IVD-209	ENST00000497816	KRTAP5-8	O75690	187 aa		4.15	□□□□□ -1.75
IVD-209	ENST00000497816	LUZP6	Q538Z0	58 aa		4.13	□□□□□ -1.75
IVD-209	ENST00000497816	OBSCN	Q5VST9	7968 aa		4.06	□□□□□ -1.76
IVD-209	ENST00000497816	MT3	P25713	68 aa		4.03	□□□□□ -1.76
IVD-209	ENST00000497816	NDUFAF8	A1L188	74 aa		3.98	□□□□□ -1.77
IVD-209	ENST00000497816	AHNAK	Q09666	5890 aa	Known RBP	3.96	□□□□□ -1.78
IVD-209	ENST00000497816	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.96	□□□□□ -1.78
IVD-209	ENST00000497816	MUC5AC	P98088	5654 aa		3.95	□□□□□ -1.78
IVD-209	ENST00000497816	KRTAP5-1	Q6L8H4	278 aa		3.91	□□□□□ -1.78
IVD-209	ENST00000497816	KRTAP9-9	Q9BYP9	154 aa		3.9	□□□□□ -1.78
IVD-209	ENST00000497816	LCE1E	Q5T753	118 aa		3.72	□□□□□ -1.81
IVD-209	ENST00000497816	KRTAP4-12	Q9BQ66	201 aa		3.57	□□□□□ -1.84
IVD-209	ENST00000497816	KRTAP4-2	Q9BYR5	136 aa		3.54	□□□□□ -1.84
IVD-209	ENST00000497816	LCE1B	Q5T7P3	118 aa		3.49	□□□□□ -1.85
IVD-209	ENST00000497816	LCE1C	Q5T751	118 aa		3.45	□□□□□ -1.86
IVD-209	ENST00000497816	LCE3D	Q9BYE3	92 aa		3.44	□□□□□ -1.86
IVD-209	ENST00000497816	INE1	O15225	51 aa		3.44	□□□□□ -1.86
IVD-209	ENST00000497816	LCE3E	Q5T5B0	92 aa		3.33	□□□□□ -1.88
IVD-209	ENST00000497816	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.16	□□□□□ -1.9
IVD-209	ENST00000497816	KRTAP5-11	Q6L8G4	156 aa		3.14	□□□□□ -1.91
IVD-209	ENST00000497816	LCE1F	Q5T754	118 aa		3.04	□□□□□ -1.92
IVD-209	ENST00000497816	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
IVD-209	ENST00000497816	PRM1	P04553	51 aa		2.79	□□□□□ -1.96
IVD-209	ENST00000497816	PHGR1	C9JFL3	82 aa		2.73	□□□□□ -1.97
IVD-209	ENST00000497816	KRTAP4-4	Q9BYR3	166 aa		2.65	□□□□□ -1.99
IVD-209	ENST00000497816	MUC19	Q7Z5P9	8384 aa		2.5	□□□□□ -2.01
IVD-209	ENST00000497816	KRTAP21-1	Q3LI58	79 aa		2.07	□□□□□ -2.08
IVD-209	ENST00000497816	MUC16	Q8WXI7	14507 aa		1.82	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms