RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
MACF1-225ENST00000497807 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
MACF1-225ENST00000497807 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
MACF1-225ENST00000497807 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
MACF1-225ENST00000497807 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
MACF1-225ENST00000497807 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
MACF1-225ENST00000497807 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
MACF1-225ENST00000497807 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
MACF1-225ENST00000497807 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
MACF1-225ENST00000497807 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
MACF1-225ENST00000497807 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
MACF1-225ENST00000497807 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
MACF1-225ENST00000497807 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
MACF1-225ENST00000497807 MT1XP80297 61 aa4.04□□□□□ -1.76
MACF1-225ENST00000497807 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
MACF1-225ENST00000497807 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
MACF1-225ENST00000497807 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
MACF1-225ENST00000497807 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
MACF1-225ENST00000497807 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
MACF1-225ENST00000497807 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
MACF1-225ENST00000497807 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
MACF1-225ENST00000497807 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
MACF1-225ENST00000497807 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
MACF1-225ENST00000497807 KMT2DO14686 5537 aa3.88□□□□□ -1.79
MACF1-225ENST00000497807 MT3P25713 68 aa3.75□□□□□ -1.81
MACF1-225ENST00000497807 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
MACF1-225ENST00000497807 NEBP20929 6669 aa3.71□□□□□ -1.82
MACF1-225ENST00000497807 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
MACF1-225ENST00000497807 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
MACF1-225ENST00000497807 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
MACF1-225ENST00000497807 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
MACF1-225ENST00000497807 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
MACF1-225ENST00000497807 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
MACF1-225ENST00000497807 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
MACF1-225ENST00000497807 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
MACF1-225ENST00000497807 SPRR2EP22531 72 aa3.58□□□□□ -1.84
MACF1-225ENST00000497807 SPRR2BP35325 72 aa3.58□□□□□ -1.84
MACF1-225ENST00000497807 SPRR2AP35326 72 aa3.58□□□□□ -1.84
MACF1-225ENST00000497807 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
MACF1-225ENST00000497807 MT1EP04732 61 aa3.56□□□□□ -1.84
MACF1-225ENST00000497807 PRM1P04553 51 aa3.48□□□□□ -1.85
MACF1-225ENST00000497807 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
MACF1-225ENST00000497807 SPRR2DP22532 72 aa3.45□□□□□ -1.86
MACF1-225ENST00000497807 MT1LQ93083 61 aa3.45□□□□□ -1.86
MACF1-225ENST00000497807 MT1GP13640 62 aa3.43□□□□□ -1.86
MACF1-225ENST00000497807 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
MACF1-225ENST00000497807 MT1MQ8N339 61 aa3.37□□□□□ -1.87
MACF1-225ENST00000497807 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.88
MACF1-225ENST00000497807 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
MACF1-225ENST00000497807 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
MACF1-225ENST00000497807 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
MACF1-225ENST00000497807 MT1AP04731 61 aa3.16□□□□□ -1.9
MACF1-225ENST00000497807 MT4P47944 62 aa3.04□□□□□ -1.92
MACF1-225ENST00000497807 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
MACF1-225ENST00000497807 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
MACF1-225ENST00000497807 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
MACF1-225ENST00000497807 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
MACF1-225ENST00000497807 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
MACF1-225ENST00000497807 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
MACF1-225ENST00000497807 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
MACF1-225ENST00000497807 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
MACF1-225ENST00000497807 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
MACF1-225ENST00000497807 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
MACF1-225ENST00000497807 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
MACF1-225ENST00000497807 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
MACF1-225ENST00000497807 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
MACF1-225ENST00000497807 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
MACF1-225ENST00000497807 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
MACF1-225ENST00000497807 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
MACF1-225ENST00000497807 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
MACF1-225ENST00000497807 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
MACF1-225ENST00000497807 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
MACF1-225ENST00000497807 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
MACF1-225ENST00000497807 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
MACF1-225ENST00000497807 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
MACF1-225ENST00000497807 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
MACF1-225ENST00000497807 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
MACF1-225ENST00000497807 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms