RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
C4A-258ENST00000496659 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
C4A-258ENST00000496659 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
C4A-258ENST00000496659 KMT2DO14686 5537 aa3.91□□□□□ -1.78
C4A-258ENST00000496659 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
C4A-258ENST00000496659 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
C4A-258ENST00000496659 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
C4A-258ENST00000496659 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
C4A-258ENST00000496659 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
C4A-258ENST00000496659 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
C4A-258ENST00000496659 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
C4A-258ENST00000496659 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
C4A-258ENST00000496659 SPRR2EP22531 72 aa3.77□□□□□ -1.81
C4A-258ENST00000496659 SPRR2BP35325 72 aa3.77□□□□□ -1.81
C4A-258ENST00000496659 SPRR2AP35326 72 aa3.77□□□□□ -1.81
C4A-258ENST00000496659 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
C4A-258ENST00000496659 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
C4A-258ENST00000496659 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
C4A-258ENST00000496659 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
C4A-258ENST00000496659 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
C4A-258ENST00000496659 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
C4A-258ENST00000496659 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
C4A-258ENST00000496659 MT1EP04732 61 aa3.66□□□□□ -1.82
C4A-258ENST00000496659 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
C4A-258ENST00000496659 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
C4A-258ENST00000496659 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
C4A-258ENST00000496659 SPRR2DP22532 72 aa3.64□□□□□ -1.83
C4A-258ENST00000496659 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
C4A-258ENST00000496659 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
C4A-258ENST00000496659 MT1LQ93083 61 aa3.56□□□□□ -1.84
C4A-258ENST00000496659 MT1GP13640 62 aa3.54□□□□□ -1.84
C4A-258ENST00000496659 MT1MQ8N339 61 aa3.46□□□□□ -1.86
C4A-258ENST00000496659 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
C4A-258ENST00000496659 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
C4A-258ENST00000496659 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
C4A-258ENST00000496659 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
C4A-258ENST00000496659 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
C4A-258ENST00000496659 MT4P47944 62 aa3.22□□□□□ -1.89
C4A-258ENST00000496659 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
C4A-258ENST00000496659 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
C4A-258ENST00000496659 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
C4A-258ENST00000496659 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
C4A-258ENST00000496659 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
C4A-258ENST00000496659 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
C4A-258ENST00000496659 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
C4A-258ENST00000496659 MT1AP04731 61 aa3.05□□□□□ -1.92
C4A-258ENST00000496659 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
C4A-258ENST00000496659 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
C4A-258ENST00000496659 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
C4A-258ENST00000496659 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
C4A-258ENST00000496659 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
C4A-258ENST00000496659 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
C4A-258ENST00000496659 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
C4A-258ENST00000496659 MT3P25713 68 aa2.8□□□□□ -1.96
C4A-258ENST00000496659 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
C4A-258ENST00000496659 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
C4A-258ENST00000496659 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
C4A-258ENST00000496659 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
C4A-258ENST00000496659 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
C4A-258ENST00000496659 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
C4A-258ENST00000496659 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
C4A-258ENST00000496659 A0A0A0MQY5 61 aa2.55□□□□□ -2
C4A-258ENST00000496659 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
C4A-258ENST00000496659 MUC5ACP98088 5654 aa2.53□□□□□ -2
C4A-258ENST00000496659 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
C4A-258ENST00000496659 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
C4A-258ENST00000496659 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
C4A-258ENST00000496659 INE1O15225 51 aa2.41□□□□□ -2.02
C4A-258ENST00000496659 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
C4A-258ENST00000496659 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
C4A-258ENST00000496659 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
C4A-258ENST00000496659 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
C4A-258ENST00000496659 PRM1P04553 51 aa2.05□□□□□ -2.08
C4A-258ENST00000496659 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
C4A-258ENST00000496659 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
C4A-258ENST00000496659 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
C4A-258ENST00000496659 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
C4A-258ENST00000496659 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms