RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
MACF1-223ENST00000496360 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
MACF1-223ENST00000496360 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
MACF1-223ENST00000496360 NEBP20929 6669 aa5.34□□□□□ -1.55
MACF1-223ENST00000496360 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
MACF1-223ENST00000496360 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
MACF1-223ENST00000496360 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
MACF1-223ENST00000496360 KMT2DO14686 5537 aa5.22□□□□□ -1.57
MACF1-223ENST00000496360 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
MACF1-223ENST00000496360 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
MACF1-223ENST00000496360 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
MACF1-223ENST00000496360 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
MACF1-223ENST00000496360 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
MACF1-223ENST00000496360 SPRR2EP22531 72 aa5.08□□□□□ -1.6
MACF1-223ENST00000496360 SPRR2BP35325 72 aa5.08□□□□□ -1.6
MACF1-223ENST00000496360 SPRR2AP35326 72 aa5.08□□□□□ -1.6
MACF1-223ENST00000496360 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
MACF1-223ENST00000496360 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
MACF1-223ENST00000496360 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
MACF1-223ENST00000496360 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
MACF1-223ENST00000496360 MT1LQ93083 61 aa4.95□□□□□ -1.62
MACF1-223ENST00000496360 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
MACF1-223ENST00000496360 SPRR2DP22532 72 aa4.91□□□□□ -1.62
MACF1-223ENST00000496360 MT1EP04732 61 aa4.87□□□□□ -1.63
MACF1-223ENST00000496360 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
MACF1-223ENST00000496360 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
MACF1-223ENST00000496360 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
MACF1-223ENST00000496360 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
MACF1-223ENST00000496360 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
MACF1-223ENST00000496360 MT1GP13640 62 aa4.58□□□□□ -1.68
MACF1-223ENST00000496360 MT1AP04731 61 aa4.56□□□□□ -1.68
MACF1-223ENST00000496360 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
MACF1-223ENST00000496360 MT1MQ8N339 61 aa4.52□□□□□ -1.69
MACF1-223ENST00000496360 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
MACF1-223ENST00000496360 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
MACF1-223ENST00000496360 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
MACF1-223ENST00000496360 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
MACF1-223ENST00000496360 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
MACF1-223ENST00000496360 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
MACF1-223ENST00000496360 PRM1P04553 51 aa4.32□□□□□ -1.72
MACF1-223ENST00000496360 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
MACF1-223ENST00000496360 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
MACF1-223ENST00000496360 MT4P47944 62 aa4.28□□□□□ -1.72
MACF1-223ENST00000496360 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
MACF1-223ENST00000496360 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
MACF1-223ENST00000496360 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
MACF1-223ENST00000496360 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
MACF1-223ENST00000496360 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
MACF1-223ENST00000496360 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
MACF1-223ENST00000496360 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.76
MACF1-223ENST00000496360 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
MACF1-223ENST00000496360 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
MACF1-223ENST00000496360 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
MACF1-223ENST00000496360 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
MACF1-223ENST00000496360 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
MACF1-223ENST00000496360 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
MACF1-223ENST00000496360 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
MACF1-223ENST00000496360 MT3P25713 68 aa3.76□□□□□ -1.81
MACF1-223ENST00000496360 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
MACF1-223ENST00000496360 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
MACF1-223ENST00000496360 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
MACF1-223ENST00000496360 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
MACF1-223ENST00000496360 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
MACF1-223ENST00000496360 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
MACF1-223ENST00000496360 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
MACF1-223ENST00000496360 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
MACF1-223ENST00000496360 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
MACF1-223ENST00000496360 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
MACF1-223ENST00000496360 LCE1CQ5T751 118 aa3□□□□□ -1.93
MACF1-223ENST00000496360 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
MACF1-223ENST00000496360 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
MACF1-223ENST00000496360 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
MACF1-223ENST00000496360 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
MACF1-223ENST00000496360 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
MACF1-223ENST00000496360 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
MACF1-223ENST00000496360 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
MACF1-223ENST00000496360 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
MACF1-223ENST00000496360 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms