RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SMIM2Q9BVW6 85 aa-0.04□□□□□ -2.42
SSR3-208ENST00000496050 TFF3Q07654 80 aa-0.05□□□□□ -2.42
SSR3-208ENST00000496050 M0QY20 66 aa-0.06□□□□□ -2.42
SSR3-208ENST00000496050 M0QZ58 72 aa-0.06□□□□□ -2.42
SSR3-208ENST00000496050 TNP1P09430 55 aa-0.06□□□□□ -2.42
SSR3-208ENST00000496050 SMR3BP02814 79 aaPredicted RBP-0.07□□□□□ -2.42
SSR3-208ENST00000496050 DEFB131AP59861 70 aa-0.07□□□□□ -2.42
SSR3-208ENST00000496050 DEFB110Q30KQ9 67 aa-0.08□□□□□ -2.42
SSR3-208ENST00000496050 IQGAP1P46940 1657 aa-0.09□□□□□ -2.42
SSR3-208ENST00000496050 A0A1B0GUL6 1792 aa-0.09□□□□□ -2.42
SSR3-208ENST00000496050 FAM208AQ9UK61 1670 aaKnown RBP-0.1□□□□□ -2.43
SSR3-208ENST00000496050 TRPM2O94759 1503 aa-0.11□□□□□ -2.43
SSR3-208ENST00000496050 NFAT5O94916 1531 aa-0.11□□□□□ -2.43
SSR3-208ENST00000496050 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
SSR3-208ENST00000496050 TOMM5Q8N4H5 51 aa-0.11□□□□□ -2.43
SSR3-208ENST00000496050 DDX60Q8IY21 1712 aaKnown RBP-0.12□□□□□ -2.43
SSR3-208ENST00000496050 NDUFA1O15239 70 aa-0.12□□□□□ -2.43
SSR3-208ENST00000496050 KRTAP19-5Q3LI72 72 aa-0.12□□□□□ -2.43
SSR3-208ENST00000496050 KRTAP8-1Q8IUC2 63 aa-0.12□□□□□ -2.43
SSR3-208ENST00000496050 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
SSR3-208ENST00000496050 IQGAP2Q13576 1575 aa-0.14□□□□□ -2.43
SSR3-208ENST00000496050 MT1HP80294 61 aa-0.15□□□□□ -2.43
SSR3-208ENST00000496050 CLPSL2Q6UWE3 100 aa-0.16□□□□□ -2.44
SSR3-208ENST00000496050 CLTCL1P53675 1640 aa-0.2□□□□□ -2.44
SSR3-208ENST00000496050 POLR2KP53803 58 aaKnown RBP-0.2□□□□□ -2.44
SSR3-208ENST00000496050 KRTAP19-8Q3LI54 63 aa-0.2□□□□□ -2.44
SSR3-208ENST00000496050 ATP7AQ04656 1500 aa-0.2□□□□□ -2.44
SSR3-208ENST00000496050 SAMD9LQ8IVG5 1584 aa-0.23□□□□□ -2.45
SSR3-208ENST00000496050 MT1BP07438 61 aa-0.23□□□□□ -2.45
SSR3-208ENST00000496050 SPART-AS1P0CW21 52 aa-0.23□□□□□ -2.45
SSR3-208ENST00000496050 DEFB1P60022 68 aa-0.23□□□□□ -2.45
SSR3-208ENST00000496050 MT1HL1P0DM35 61 aa-0.24□□□□□ -2.45
SSR3-208ENST00000496050 DEFB104AQ8WTQ1 72 aa-0.25□□□□□ -2.45
SSR3-208ENST00000496050 KRTAP19-2Q3LHN2 52 aa-0.26□□□□□ -2.45
SSR3-208ENST00000496050 MT1EP04732 61 aa-0.28□□□□□ -2.45
SSR3-208ENST00000496050 MT1FP04733 61 aa-0.29□□□□□ -2.46
SSR3-208ENST00000496050 TOP2AP11388 1531 aaKnown RBP-0.29□□□□□ -2.46
SSR3-208ENST00000496050 MT2AP02795 61 aa-0.3□□□□□ -2.46
SSR3-208ENST00000496050 DEFB124Q8NES8 71 aa-0.33□□□□□ -2.46
SSR3-208ENST00000496050 MT1LQ93083 61 aa-0.33□□□□□ -2.46
SSR3-208ENST00000496050 MT1XP80297 61 aa-0.34□□□□□ -2.46
SSR3-208ENST00000496050 MROH2BQ7Z745 1585 aa-0.35□□□□□ -2.47
SSR3-208ENST00000496050 RPL39P62891 51 aaKnown RBP-0.35□□□□□ -2.47
SSR3-208ENST00000496050 LEAP2Q969E1 77 aa-0.36□□□□□ -2.47
SSR3-208ENST00000496050 MT1GP13640 62 aa-0.38□□□□□ -2.47
SSR3-208ENST00000496050 TOMM7Q9P0U1 55 aa-0.38□□□□□ -2.47
SSR3-208ENST00000496050 MT1MQ8N339 61 aa-0.39□□□□□ -2.47
SSR3-208ENST00000496050 SNRPGP62308 76 aaKnown RBP-0.4□□□□□ -2.47
SSR3-208ENST00000496050 RPL39LQ96EH5 51 aaKnown RBP-0.41□□□□□ -2.48
SSR3-208ENST00000496050 DEFB136Q30KP8 78 aa-0.42□□□□□ -2.48
SSR3-208ENST00000496050 LINC01590Q5TEZ4 76 aa-0.42□□□□□ -2.48
SSR3-208ENST00000496050 DUOX1Q9NRD9 1551 aa-0.43□□□□□ -2.48
SSR3-208ENST00000496050 DEFB4AO15263 64 aa-0.52□□□□□ -2.49
SSR3-208ENST00000496050 RHPN1-AS1Q9BWJ2 59 aa-0.54□□□□□ -2.5
SSR3-208ENST00000496050 GCC2Q8IWJ2 1684 aa-0.56□□□□□ -2.5
SSR3-208ENST00000496050 RPS29P62273 56 aaKnown RBP-0.57□□□□□ -2.5
SSR3-208ENST00000496050 K7EIM0 57 aa-0.61□□□□□ -2.51
SSR3-208ENST00000496050 STATHP02808 62 aa-0.61□□□□□ -2.51
SSR3-208ENST00000496050 ARHGAP5-AS1Q96IT6 56 aa-0.61□□□□□ -2.51
SSR3-208ENST00000496050 A0A096LNI7 61 aa-0.64□□□□□ -2.51
SSR3-208ENST00000496050 PRCDQ00LT1 54 aa-0.66□□□□□ -2.52
SSR3-208ENST00000496050 DEFB133Q30KQ1 61 aa-0.67□□□□□ -2.52
SSR3-208ENST00000496050 H3BUX3 64 aa-0.68□□□□□ -2.52
SSR3-208ENST00000496050 TTTY10Q9BZA0 68 aa-0.69□□□□□ -2.52
SSR3-208ENST00000496050 HTN1P15515 57 aa-0.71□□□□□ -2.52
SSR3-208ENST00000496050 DEFB108AA8MXU0 73 aa-0.77□□□□□ -2.53
SSR3-208ENST00000496050 CD52P31358 61 aa-0.77□□□□□ -2.53
SSR3-208ENST00000496050 TMEM167AQ8TBQ9 72 aa-0.77□□□□□ -2.53
SSR3-208ENST00000496050 H3BSH0 61 aa-0.83□□□□□ -2.54
SSR3-208ENST00000496050 DEFB108BQ8NET1 73 aa-0.88□□□□□ -2.55
SSR3-208ENST00000496050 RPL39P5Q59GN2 51 aa-0.89□□□□□ -2.55
SSR3-208ENST00000496050 LINC01556Q5JQF7 62 aa-0.92□□□□□ -2.56
SSR3-208ENST00000496050 Q9Y3F1 56 aa-0.95□□□□□ -2.56
SSR3-208ENST00000496050 HTN3P15516 51 aa-0.97□□□□□ -2.56
SSR3-208ENST00000496050 COX14Q96I36 57 aa-1□□□□□ -2.57
SSR3-208ENST00000496050 A0A096LPF7 62 aa-1.01□□□□□ -2.57
SSR3-208ENST00000496050 APELAP0DMC3 54 aa-1.01□□□□□ -2.57
Retrieved 77 of 20,778 RNA–protein pairs in 40.4 ms