RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 KRTAP4-8A0A0G2JLE6 195 aa3.81□□□□□ -1.8
HDAC3-214ENST00000495485 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
HDAC3-214ENST00000495485 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
HDAC3-214ENST00000495485 SPRR2EP22531 72 aa3.73□□□□□ -1.81
HDAC3-214ENST00000495485 SPRR2BP35325 72 aa3.73□□□□□ -1.81
HDAC3-214ENST00000495485 SPRR2AP35326 72 aa3.73□□□□□ -1.81
HDAC3-214ENST00000495485 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
HDAC3-214ENST00000495485 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
HDAC3-214ENST00000495485 MT1EP04732 61 aa3.67□□□□□ -1.82
HDAC3-214ENST00000495485 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
HDAC3-214ENST00000495485 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
HDAC3-214ENST00000495485 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
HDAC3-214ENST00000495485 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
HDAC3-214ENST00000495485 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
HDAC3-214ENST00000495485 SPRR2DP22532 72 aa3.62□□□□□ -1.83
HDAC3-214ENST00000495485 MT1LQ93083 61 aa3.62□□□□□ -1.83
HDAC3-214ENST00000495485 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
HDAC3-214ENST00000495485 MT1GP13640 62 aa3.59□□□□□ -1.83
HDAC3-214ENST00000495485 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
HDAC3-214ENST00000495485 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
HDAC3-214ENST00000495485 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
HDAC3-214ENST00000495485 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
HDAC3-214ENST00000495485 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
HDAC3-214ENST00000495485 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
HDAC3-214ENST00000495485 MT1MQ8N339 61 aa3.46□□□□□ -1.86
HDAC3-214ENST00000495485 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
HDAC3-214ENST00000495485 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
HDAC3-214ENST00000495485 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
HDAC3-214ENST00000495485 H3BS24 57 aa3.33□□□□□ -1.88
HDAC3-214ENST00000495485 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
HDAC3-214ENST00000495485 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
HDAC3-214ENST00000495485 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
HDAC3-214ENST00000495485 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
HDAC3-214ENST00000495485 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
HDAC3-214ENST00000495485 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
HDAC3-214ENST00000495485 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
HDAC3-214ENST00000495485 INE1O15225 51 aa3.12□□□□□ -1.91
HDAC3-214ENST00000495485 MT1AP04731 61 aa3.11□□□□□ -1.91
HDAC3-214ENST00000495485 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
HDAC3-214ENST00000495485 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
HDAC3-214ENST00000495485 MT4P47944 62 aa3.09□□□□□ -1.91
HDAC3-214ENST00000495485 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
HDAC3-214ENST00000495485 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
HDAC3-214ENST00000495485 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
HDAC3-214ENST00000495485 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
HDAC3-214ENST00000495485 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
HDAC3-214ENST00000495485 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
HDAC3-214ENST00000495485 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
HDAC3-214ENST00000495485 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
HDAC3-214ENST00000495485 MT3P25713 68 aa2.86□□□□□ -1.95
HDAC3-214ENST00000495485 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
HDAC3-214ENST00000495485 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
HDAC3-214ENST00000495485 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
HDAC3-214ENST00000495485 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
HDAC3-214ENST00000495485 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
HDAC3-214ENST00000495485 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
HDAC3-214ENST00000495485 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
HDAC3-214ENST00000495485 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
HDAC3-214ENST00000495485 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
HDAC3-214ENST00000495485 KRTAP5-8O75690 187 aa2.58□□□□□ -2
HDAC3-214ENST00000495485 MUC5ACP98088 5654 aa2.57□□□□□ -2
HDAC3-214ENST00000495485 LCE1EQ5T753 118 aa2.55□□□□□ -2
HDAC3-214ENST00000495485 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
HDAC3-214ENST00000495485 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
HDAC3-214ENST00000495485 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
HDAC3-214ENST00000495485 PRM1P04553 51 aa2.36□□□□□ -2.03
HDAC3-214ENST00000495485 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
HDAC3-214ENST00000495485 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
HDAC3-214ENST00000495485 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
HDAC3-214ENST00000495485 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
HDAC3-214ENST00000495485 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
HDAC3-214ENST00000495485 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
HDAC3-214ENST00000495485 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
HDAC3-214ENST00000495485 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
HDAC3-214ENST00000495485 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
HDAC3-214ENST00000495485 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
HDAC3-214ENST00000495485 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
HDAC3-214ENST00000495485 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 239.7 ms