RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
FDPS-219ENST00000495308 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
FDPS-219ENST00000495308 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
FDPS-219ENST00000495308 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
FDPS-219ENST00000495308 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
FDPS-219ENST00000495308 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
FDPS-219ENST00000495308 MT1LQ93083 61 aa4.85□□□□□ -1.63
FDPS-219ENST00000495308 MT1GP13640 62 aa4.83□□□□□ -1.64
FDPS-219ENST00000495308 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
FDPS-219ENST00000495308 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
FDPS-219ENST00000495308 MT1MQ8N339 61 aa4.79□□□□□ -1.64
FDPS-219ENST00000495308 ROMO1P60602 79 aa4.75□□□□□ -1.65
FDPS-219ENST00000495308 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
FDPS-219ENST00000495308 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
FDPS-219ENST00000495308 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
FDPS-219ENST00000495308 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
FDPS-219ENST00000495308 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
FDPS-219ENST00000495308 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
FDPS-219ENST00000495308 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
FDPS-219ENST00000495308 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
FDPS-219ENST00000495308 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
FDPS-219ENST00000495308 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
FDPS-219ENST00000495308 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
FDPS-219ENST00000495308 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
FDPS-219ENST00000495308 MT4P47944 62 aa4.42□□□□□ -1.7
FDPS-219ENST00000495308 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
FDPS-219ENST00000495308 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
FDPS-219ENST00000495308 H3BS24 57 aa4.4□□□□□ -1.71
FDPS-219ENST00000495308 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
FDPS-219ENST00000495308 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
FDPS-219ENST00000495308 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
FDPS-219ENST00000495308 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
FDPS-219ENST00000495308 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
FDPS-219ENST00000495308 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
FDPS-219ENST00000495308 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
FDPS-219ENST00000495308 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
FDPS-219ENST00000495308 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
FDPS-219ENST00000495308 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
FDPS-219ENST00000495308 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
FDPS-219ENST00000495308 MT1AP04731 61 aa4.12□□□□□ -1.75
FDPS-219ENST00000495308 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
FDPS-219ENST00000495308 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
FDPS-219ENST00000495308 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
FDPS-219ENST00000495308 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
FDPS-219ENST00000495308 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
FDPS-219ENST00000495308 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
FDPS-219ENST00000495308 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
FDPS-219ENST00000495308 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
FDPS-219ENST00000495308 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
FDPS-219ENST00000495308 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
FDPS-219ENST00000495308 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
FDPS-219ENST00000495308 MT3P25713 68 aa3.75□□□□□ -1.81
FDPS-219ENST00000495308 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
FDPS-219ENST00000495308 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
FDPS-219ENST00000495308 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
FDPS-219ENST00000495308 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
FDPS-219ENST00000495308 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
FDPS-219ENST00000495308 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
FDPS-219ENST00000495308 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
FDPS-219ENST00000495308 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
FDPS-219ENST00000495308 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
FDPS-219ENST00000495308 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
FDPS-219ENST00000495308 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
FDPS-219ENST00000495308 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
FDPS-219ENST00000495308 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
FDPS-219ENST00000495308 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
FDPS-219ENST00000495308 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
FDPS-219ENST00000495308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
FDPS-219ENST00000495308 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
FDPS-219ENST00000495308 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
FDPS-219ENST00000495308 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
FDPS-219ENST00000495308 INE1O15225 51 aa2.6□□□□□ -1.99
FDPS-219ENST00000495308 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
FDPS-219ENST00000495308 PRM1P04553 51 aa2.46□□□□□ -2.02
FDPS-219ENST00000495308 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
FDPS-219ENST00000495308 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
FDPS-219ENST00000495308 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
FDPS-219ENST00000495308 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms