RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
UBXN11-215ENST00000494942 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
UBXN11-215ENST00000494942 MT1LQ93083 61 aa5.14□□□□□ -1.59
UBXN11-215ENST00000494942 MT1EP04732 61 aa5.14□□□□□ -1.59
UBXN11-215ENST00000494942 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
UBXN11-215ENST00000494942 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
UBXN11-215ENST00000494942 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
UBXN11-215ENST00000494942 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
UBXN11-215ENST00000494942 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
UBXN11-215ENST00000494942 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
UBXN11-215ENST00000494942 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
UBXN11-215ENST00000494942 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
UBXN11-215ENST00000494942 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
UBXN11-215ENST00000494942 MT1GP13640 62 aa4.82□□□□□ -1.64
UBXN11-215ENST00000494942 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
UBXN11-215ENST00000494942 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
UBXN11-215ENST00000494942 MT1MQ8N339 61 aa4.8□□□□□ -1.64
UBXN11-215ENST00000494942 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
UBXN11-215ENST00000494942 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
UBXN11-215ENST00000494942 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
UBXN11-215ENST00000494942 NEBP20929 6669 aa4.66□□□□□ -1.66
UBXN11-215ENST00000494942 SPRR2EP22531 72 aa4.64□□□□□ -1.67
UBXN11-215ENST00000494942 SPRR2BP35325 72 aa4.64□□□□□ -1.67
UBXN11-215ENST00000494942 SPRR2AP35326 72 aa4.64□□□□□ -1.67
UBXN11-215ENST00000494942 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
UBXN11-215ENST00000494942 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
UBXN11-215ENST00000494942 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
UBXN11-215ENST00000494942 SPRR2DP22532 72 aa4.48□□□□□ -1.69
UBXN11-215ENST00000494942 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
UBXN11-215ENST00000494942 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
UBXN11-215ENST00000494942 MT1AP04731 61 aa4.39□□□□□ -1.71
UBXN11-215ENST00000494942 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
UBXN11-215ENST00000494942 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
UBXN11-215ENST00000494942 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
UBXN11-215ENST00000494942 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
UBXN11-215ENST00000494942 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
UBXN11-215ENST00000494942 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
UBXN11-215ENST00000494942 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
UBXN11-215ENST00000494942 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
UBXN11-215ENST00000494942 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.76
UBXN11-215ENST00000494942 PRM1P04553 51 aa3.98□□□□□ -1.77
UBXN11-215ENST00000494942 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
UBXN11-215ENST00000494942 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
UBXN11-215ENST00000494942 MT4P47944 62 aa3.92□□□□□ -1.78
UBXN11-215ENST00000494942 MT3P25713 68 aa3.92□□□□□ -1.78
UBXN11-215ENST00000494942 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
UBXN11-215ENST00000494942 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
UBXN11-215ENST00000494942 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
UBXN11-215ENST00000494942 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
UBXN11-215ENST00000494942 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
UBXN11-215ENST00000494942 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
UBXN11-215ENST00000494942 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
UBXN11-215ENST00000494942 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
UBXN11-215ENST00000494942 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
UBXN11-215ENST00000494942 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
UBXN11-215ENST00000494942 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
UBXN11-215ENST00000494942 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
UBXN11-215ENST00000494942 LCE1EQ5T753 118 aa3.21□□□□□ -1.89
UBXN11-215ENST00000494942 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
UBXN11-215ENST00000494942 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
UBXN11-215ENST00000494942 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
UBXN11-215ENST00000494942 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
UBXN11-215ENST00000494942 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
UBXN11-215ENST00000494942 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
UBXN11-215ENST00000494942 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
UBXN11-215ENST00000494942 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
UBXN11-215ENST00000494942 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
UBXN11-215ENST00000494942 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
UBXN11-215ENST00000494942 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
UBXN11-215ENST00000494942 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
UBXN11-215ENST00000494942 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -2
UBXN11-215ENST00000494942 LCE1FQ5T754 118 aa2.58□□□□□ -2
UBXN11-215ENST00000494942 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
UBXN11-215ENST00000494942 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
UBXN11-215ENST00000494942 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
UBXN11-215ENST00000494942 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
UBXN11-215ENST00000494942 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
UBXN11-215ENST00000494942 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms