RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 MT1EP04732 61 aa6.37□□□□□ -1.39
SNX17-209ENST00000494893 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
SNX17-209ENST00000494893 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
SNX17-209ENST00000494893 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
SNX17-209ENST00000494893 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
SNX17-209ENST00000494893 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
SNX17-209ENST00000494893 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
SNX17-209ENST00000494893 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
SNX17-209ENST00000494893 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
SNX17-209ENST00000494893 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
SNX17-209ENST00000494893 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
SNX17-209ENST00000494893 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
SNX17-209ENST00000494893 MT1LQ93083 61 aa6.12□□□□□ -1.43
SNX17-209ENST00000494893 MT1GP13640 62 aa6.11□□□□□ -1.43
SNX17-209ENST00000494893 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
SNX17-209ENST00000494893 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
SNX17-209ENST00000494893 MT1MQ8N339 61 aa6.05□□□□□ -1.44
SNX17-209ENST00000494893 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
SNX17-209ENST00000494893 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
SNX17-209ENST00000494893 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
SNX17-209ENST00000494893 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
SNX17-209ENST00000494893 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
SNX17-209ENST00000494893 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SNX17-209ENST00000494893 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
SNX17-209ENST00000494893 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
SNX17-209ENST00000494893 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SNX17-209ENST00000494893 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
SNX17-209ENST00000494893 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
SNX17-209ENST00000494893 MT4P47944 62 aa5.6□□□□□ -1.51
SNX17-209ENST00000494893 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
SNX17-209ENST00000494893 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
SNX17-209ENST00000494893 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
SNX17-209ENST00000494893 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
SNX17-209ENST00000494893 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
SNX17-209ENST00000494893 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
SNX17-209ENST00000494893 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
SNX17-209ENST00000494893 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
SNX17-209ENST00000494893 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
SNX17-209ENST00000494893 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
SNX17-209ENST00000494893 MT1AP04731 61 aa5.2□□□□□ -1.58
SNX17-209ENST00000494893 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
SNX17-209ENST00000494893 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
SNX17-209ENST00000494893 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
SNX17-209ENST00000494893 LUZP6Q538Z0 58 aa5.15□□□□□ -1.59
SNX17-209ENST00000494893 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
SNX17-209ENST00000494893 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
SNX17-209ENST00000494893 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
SNX17-209ENST00000494893 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
SNX17-209ENST00000494893 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
SNX17-209ENST00000494893 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
SNX17-209ENST00000494893 MT3P25713 68 aa4.71□□□□□ -1.66
SNX17-209ENST00000494893 H3BS24 57 aa4.66□□□□□ -1.66
SNX17-209ENST00000494893 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
SNX17-209ENST00000494893 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
SNX17-209ENST00000494893 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
SNX17-209ENST00000494893 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
SNX17-209ENST00000494893 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
SNX17-209ENST00000494893 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
SNX17-209ENST00000494893 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SNX17-209ENST00000494893 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
SNX17-209ENST00000494893 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
SNX17-209ENST00000494893 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
SNX17-209ENST00000494893 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
SNX17-209ENST00000494893 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
SNX17-209ENST00000494893 INE1O15225 51 aa4.02□□□□□ -1.77
SNX17-209ENST00000494893 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
SNX17-209ENST00000494893 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
SNX17-209ENST00000494893 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
SNX17-209ENST00000494893 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
SNX17-209ENST00000494893 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
SNX17-209ENST00000494893 PRM1P04553 51 aa3.45□□□□□ -1.86
SNX17-209ENST00000494893 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
SNX17-209ENST00000494893 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SNX17-209ENST00000494893 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
SNX17-209ENST00000494893 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SNX17-209ENST00000494893 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SNX17-209ENST00000494893 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SNX17-209ENST00000494893 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 114.8 ms