RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
USP34-221ENST00000494867 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
USP34-221ENST00000494867 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
USP34-221ENST00000494867 A6NED7 52 aa4.43□□□□□ -1.7
USP34-221ENST00000494867 KMT2DO14686 5537 aa4.42□□□□□ -1.7
USP34-221ENST00000494867 K7ERS5 55 aa4.41□□□□□ -1.7
USP34-221ENST00000494867 SPRR2EP22531 72 aa4.41□□□□□ -1.7
USP34-221ENST00000494867 SPRR2BP35325 72 aa4.41□□□□□ -1.7
USP34-221ENST00000494867 SPRR2AP35326 72 aa4.41□□□□□ -1.7
USP34-221ENST00000494867 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
USP34-221ENST00000494867 TNP1P09430 55 aa4.38□□□□□ -1.71
USP34-221ENST00000494867 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
USP34-221ENST00000494867 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
USP34-221ENST00000494867 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
USP34-221ENST00000494867 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
USP34-221ENST00000494867 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
USP34-221ENST00000494867 SPRR2DP22532 72 aa4.26□□□□□ -1.73
USP34-221ENST00000494867 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
USP34-221ENST00000494867 MT1EP04732 61 aa4.25□□□□□ -1.73
USP34-221ENST00000494867 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
USP34-221ENST00000494867 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
USP34-221ENST00000494867 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
USP34-221ENST00000494867 NEBP20929 6669 aa4.19□□□□□ -1.74
USP34-221ENST00000494867 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
USP34-221ENST00000494867 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
USP34-221ENST00000494867 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
USP34-221ENST00000494867 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
USP34-221ENST00000494867 ROMO1P60602 79 aa4.13□□□□□ -1.75
USP34-221ENST00000494867 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
USP34-221ENST00000494867 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
USP34-221ENST00000494867 MT1LQ93083 61 aa4.1□□□□□ -1.75
USP34-221ENST00000494867 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
USP34-221ENST00000494867 MT1GP13640 62 aa4.07□□□□□ -1.76
USP34-221ENST00000494867 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
USP34-221ENST00000494867 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
USP34-221ENST00000494867 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
USP34-221ENST00000494867 MT1MQ8N339 61 aa4.03□□□□□ -1.76
USP34-221ENST00000494867 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
USP34-221ENST00000494867 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
USP34-221ENST00000494867 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
USP34-221ENST00000494867 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
USP34-221ENST00000494867 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
USP34-221ENST00000494867 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
USP34-221ENST00000494867 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
USP34-221ENST00000494867 MT4P47944 62 aa3.7□□□□□ -1.82
USP34-221ENST00000494867 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
USP34-221ENST00000494867 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
USP34-221ENST00000494867 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
USP34-221ENST00000494867 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
USP34-221ENST00000494867 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
USP34-221ENST00000494867 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
USP34-221ENST00000494867 MT1AP04731 61 aa3.49□□□□□ -1.85
USP34-221ENST00000494867 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
USP34-221ENST00000494867 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
USP34-221ENST00000494867 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
USP34-221ENST00000494867 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
USP34-221ENST00000494867 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
USP34-221ENST00000494867 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
USP34-221ENST00000494867 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
USP34-221ENST00000494867 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
USP34-221ENST00000494867 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
USP34-221ENST00000494867 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
USP34-221ENST00000494867 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
USP34-221ENST00000494867 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
USP34-221ENST00000494867 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
USP34-221ENST00000494867 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
USP34-221ENST00000494867 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
USP34-221ENST00000494867 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
USP34-221ENST00000494867 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
USP34-221ENST00000494867 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
USP34-221ENST00000494867 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
USP34-221ENST00000494867 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
USP34-221ENST00000494867 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
USP34-221ENST00000494867 INE1O15225 51 aa2.13□□□□□ -2.07
USP34-221ENST00000494867 PRM1P04553 51 aa2.13□□□□□ -2.07
USP34-221ENST00000494867 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
USP34-221ENST00000494867 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
USP34-221ENST00000494867 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 54.7 ms