RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.73
PRPF4B-209ENST00000494674 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
PRPF4B-209ENST00000494674 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
PRPF4B-209ENST00000494674 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
PRPF4B-209ENST00000494674 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
PRPF4B-209ENST00000494674 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
PRPF4B-209ENST00000494674 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
PRPF4B-209ENST00000494674 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
PRPF4B-209ENST00000494674 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
PRPF4B-209ENST00000494674 KMT2DO14686 5537 aa4.05□□□□□ -1.76
PRPF4B-209ENST00000494674 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
PRPF4B-209ENST00000494674 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
PRPF4B-209ENST00000494674 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
PRPF4B-209ENST00000494674 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
PRPF4B-209ENST00000494674 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
PRPF4B-209ENST00000494674 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
PRPF4B-209ENST00000494674 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
PRPF4B-209ENST00000494674 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
PRPF4B-209ENST00000494674 MT1EP04732 61 aa3.82□□□□□ -1.8
PRPF4B-209ENST00000494674 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
PRPF4B-209ENST00000494674 MT1LQ93083 61 aa3.77□□□□□ -1.81
PRPF4B-209ENST00000494674 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
PRPF4B-209ENST00000494674 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
PRPF4B-209ENST00000494674 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
PRPF4B-209ENST00000494674 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
PRPF4B-209ENST00000494674 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
PRPF4B-209ENST00000494674 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
PRPF4B-209ENST00000494674 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
PRPF4B-209ENST00000494674 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
PRPF4B-209ENST00000494674 MT1MQ8N339 61 aa3.59□□□□□ -1.83
PRPF4B-209ENST00000494674 MT1GP13640 62 aa3.58□□□□□ -1.84
PRPF4B-209ENST00000494674 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
PRPF4B-209ENST00000494674 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
PRPF4B-209ENST00000494674 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
PRPF4B-209ENST00000494674 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
PRPF4B-209ENST00000494674 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
PRPF4B-209ENST00000494674 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
PRPF4B-209ENST00000494674 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
PRPF4B-209ENST00000494674 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
PRPF4B-209ENST00000494674 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
PRPF4B-209ENST00000494674 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
PRPF4B-209ENST00000494674 SPRR2EP22531 72 aa3.37□□□□□ -1.87
PRPF4B-209ENST00000494674 SPRR2BP35325 72 aa3.37□□□□□ -1.87
PRPF4B-209ENST00000494674 SPRR2AP35326 72 aa3.37□□□□□ -1.87
PRPF4B-209ENST00000494674 NEBP20929 6669 aa3.27□□□□□ -1.89
PRPF4B-209ENST00000494674 SPRR2DP22532 72 aa3.24□□□□□ -1.89
PRPF4B-209ENST00000494674 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
PRPF4B-209ENST00000494674 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PRPF4B-209ENST00000494674 INE1O15225 51 aa3.19□□□□□ -1.9
PRPF4B-209ENST00000494674 MT1AP04731 61 aa3.19□□□□□ -1.9
PRPF4B-209ENST00000494674 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
PRPF4B-209ENST00000494674 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
PRPF4B-209ENST00000494674 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
PRPF4B-209ENST00000494674 MT3P25713 68 aa2.93□□□□□ -1.94
PRPF4B-209ENST00000494674 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
PRPF4B-209ENST00000494674 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
PRPF4B-209ENST00000494674 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
PRPF4B-209ENST00000494674 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
PRPF4B-209ENST00000494674 MT4P47944 62 aa2.82□□□□□ -1.96
PRPF4B-209ENST00000494674 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
PRPF4B-209ENST00000494674 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
PRPF4B-209ENST00000494674 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
PRPF4B-209ENST00000494674 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
PRPF4B-209ENST00000494674 PRM1P04553 51 aa2.53□□□□□ -2
PRPF4B-209ENST00000494674 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
PRPF4B-209ENST00000494674 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
PRPF4B-209ENST00000494674 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
PRPF4B-209ENST00000494674 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
PRPF4B-209ENST00000494674 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
PRPF4B-209ENST00000494674 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
PRPF4B-209ENST00000494674 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PRPF4B-209ENST00000494674 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
PRPF4B-209ENST00000494674 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
PRPF4B-209ENST00000494674 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
PRPF4B-209ENST00000494674 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PRPF4B-209ENST00000494674 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PRPF4B-209ENST00000494674 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PRPF4B-209ENST00000494674 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms