RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ACYP2P14621 99 aa0.95□□□□□ -2.26
SMC4-224ENST00000494612 MUSTN1Q8IVN3 82 aa0.95□□□□□ -2.26
SMC4-224ENST00000494612 C14orf144Q96I85 54 aa0.95□□□□□ -2.26
SMC4-224ENST00000494612 SPRR2GQ9BYE4 73 aa0.95□□□□□ -2.26
SMC4-224ENST00000494612 BVES-AS1Q5T3Y7 98 aa0.94□□□□□ -2.26
SMC4-224ENST00000494612 TRBV7-4A0A0J9YYF1 115 aa0.93□□□□□ -2.26
SMC4-224ENST00000494612 HSD52Q0P140 79 aa0.93□□□□□ -2.26
SMC4-224ENST00000494612 CYP4F30PQ9H0H9 118 aa0.93□□□□□ -2.26
SMC4-224ENST00000494612 LINC00472Q9H8W2 130 aa0.93□□□□□ -2.26
SMC4-224ENST00000494612 SYS1-DBNDD2H3BUS1 97 aa0.92□□□□□ -2.26
SMC4-224ENST00000494612 NDUFB1O75438 58 aa0.92□□□□□ -2.26
SMC4-224ENST00000494612 S4R3F8 94 aa0.92□□□□□ -2.26
SMC4-224ENST00000494612 H0YGX0 51 aa0.91□□□□□ -2.26
SMC4-224ENST00000494612 APOC3P02656 99 aa0.91□□□□□ -2.26
SMC4-224ENST00000494612 CRIPTQ9P021 101 aa0.91□□□□□ -2.26
SMC4-224ENST00000494612 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
SMC4-224ENST00000494612 ATP5EP56381 51 aaPredicted RBP0.9□□□□□ -2.27
SMC4-224ENST00000494612 KRTDAPP60985 99 aa0.9□□□□□ -2.27
SMC4-224ENST00000494612 MT1XP80297 61 aa0.9□□□□□ -2.27
SMC4-224ENST00000494612 PRR15LQ9BU68 103 aa0.9□□□□□ -2.27
SMC4-224ENST00000494612 A0A0D9SG42 100 aa0.89□□□□□ -2.27
SMC4-224ENST00000494612 MT4P47944 62 aa0.89□□□□□ -2.27
SMC4-224ENST00000494612 MRPL34Q9BQ48 92 aaKnown RBP0.89□□□□□ -2.27
SMC4-224ENST00000494612 K7EQZ3 153 aa0.88□□□□□ -2.27
SMC4-224ENST00000494612 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
SMC4-224ENST00000494612 CHKB-CPT1BH3BT56 60 aa0.86□□□□□ -2.27
SMC4-224ENST00000494612 NREPQ16612 68 aa0.85□□□□□ -2.27
SMC4-224ENST00000494612 UQCR10Q9UDW1 63 aa0.85□□□□□ -2.27
SMC4-224ENST00000494612 PRO1854Q9UHT4 67 aa0.85□□□□□ -2.27
SMC4-224ENST00000494612 H0YAA0 97 aa0.84□□□□□ -2.27
SMC4-224ENST00000494612 M0R143 59 aa0.84□□□□□ -2.27
SMC4-224ENST00000494612 NDUFC1O43677 76 aa0.84□□□□□ -2.27
SMC4-224ENST00000494612 COX6CP09669 75 aa0.84□□□□□ -2.27
SMC4-224ENST00000494612 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.28
SMC4-224ENST00000494612 M0QZ58 72 aa0.83□□□□□ -2.28
SMC4-224ENST00000494612 COX8AP10176 69 aa0.83□□□□□ -2.28
SMC4-224ENST00000494612 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
SMC4-224ENST00000494612 A0A087WVE0 104 aa0.82□□□□□ -2.28
SMC4-224ENST00000494612 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
SMC4-224ENST00000494612 MT1EP04732 61 aa0.81□□□□□ -2.28
SMC4-224ENST00000494612 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
SMC4-224ENST00000494612 HIGD1BQ9P298 99 aa0.81□□□□□ -2.28
SMC4-224ENST00000494612 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
SMC4-224ENST00000494612 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
SMC4-224ENST00000494612 TRAV22A0A0B4J277 110 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 K7EP34 96 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 UQCR11O14957 56 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 MT-ATP8P03928 68 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 MT1GP13640 62 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 ATXN8Q156A1 80 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
SMC4-224ENST00000494612 ACYP1P07311 99 aa0.79□□□□□ -2.28
SMC4-224ENST00000494612 VAMP8Q9BV40 100 aa0.79□□□□□ -2.28
SMC4-224ENST00000494612 TP53AIP1Q9HCN2 124 aa0.79□□□□□ -2.28
SMC4-224ENST00000494612 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
SMC4-224ENST00000494612 MT1MQ8N339 61 aa0.78□□□□□ -2.28
SMC4-224ENST00000494612 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
SMC4-224ENST00000494612 COL5A1-AS1Q5SY13 56 aa0.77□□□□□ -2.29
SMC4-224ENST00000494612 MT1LQ93083 61 aa0.75□□□□□ -2.29
SMC4-224ENST00000494612 UBL5Q9BZL1 73 aa0.75□□□□□ -2.29
SMC4-224ENST00000494612 SPCS1Q9Y6A9 102 aa0.75□□□□□ -2.29
SMC4-224ENST00000494612 H0Y9P7 68 aa0.73□□□□□ -2.29
SMC4-224ENST00000494612 ATOX1O00244 68 aa0.73□□□□□ -2.29
SMC4-224ENST00000494612 SERP2Q8N6R1 65 aa0.69□□□□□ -2.3
SMC4-224ENST00000494612 PYY3Q5JQD4 70 aa0.68□□□□□ -2.3
SMC4-224ENST00000494612 TNP1P09430 55 aa0.66□□□□□ -2.3
SMC4-224ENST00000494612 H7BZZ5 65 aa0.65□□□□□ -2.31
SMC4-224ENST00000494612 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
SMC4-224ENST00000494612 MT1AP04731 61 aa0.64□□□□□ -2.31
SMC4-224ENST00000494612 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
SMC4-224ENST00000494612 ATP5EP2Q5VTU8 51 aa0.64□□□□□ -2.31
SMC4-224ENST00000494612 ETDBQ3ZM63 59 aa0.62□□□□□ -2.31
SMC4-224ENST00000494612 LINC00643Q86TS7 51 aa0.59□□□□□ -2.31
SMC4-224ENST00000494612 A0A1B0GU69 56 aa0.57□□□□□ -2.32
SMC4-224ENST00000494612 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
SMC4-224ENST00000494612 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
SMC4-224ENST00000494612 PRM1P04553 51 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 131.4 ms