RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
MSL3-217ENST00000494268 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
MSL3-217ENST00000494268 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
MSL3-217ENST00000494268 MYCBP2O75592 4640 aa2.01□□□□□ -2.09
MSL3-217ENST00000494268 TNXBP22105 4242 aa2□□□□□ -2.09
MSL3-217ENST00000494268 DMBT1Q9UGM3 2413 aaPredicted RBP1.99□□□□□ -2.09
MSL3-217ENST00000494268 A0A0D9SG42 100 aa1.99□□□□□ -2.09
MSL3-217ENST00000494268 SPINK6Q6UWN8 80 aa1.99□□□□□ -2.09
MSL3-217ENST00000494268 M0QZ58 72 aa1.98□□□□□ -2.09
MSL3-217ENST00000494268 HERC1Q15751 4861 aa1.97□□□□□ -2.09
MSL3-217ENST00000494268 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
MSL3-217ENST00000494268 LPAP08519 4548 aa1.89□□□□□ -2.11
MSL3-217ENST00000494268 C9orf92A6NGG3 77 aa1.88□□□□□ -2.11
MSL3-217ENST00000494268 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
MSL3-217ENST00000494268 UBR4Q5T4S7 5183 aa1.87□□□□□ -2.11
MSL3-217ENST00000494268 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
MSL3-217ENST00000494268 LRP2P98164 4655 aa1.86□□□□□ -2.11
MSL3-217ENST00000494268 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
MSL3-217ENST00000494268 MUC17Q685J3 4493 aa1.81□□□□□ -2.12
MSL3-217ENST00000494268 MUC2Q02817 5179 aa1.81□□□□□ -2.12
MSL3-217ENST00000494268 TNP1P09430 55 aa1.75□□□□□ -2.13
MSL3-217ENST00000494268 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
MSL3-217ENST00000494268 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
MSL3-217ENST00000494268 FAT4Q6V0I7 4981 aa1.72□□□□□ -2.13
MSL3-217ENST00000494268 MT1HP80294 61 aa1.71□□□□□ -2.14
MSL3-217ENST00000494268 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
MSL3-217ENST00000494268 M0R2T5 61 aa1.7□□□□□ -2.14
MSL3-217ENST00000494268 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
MSL3-217ENST00000494268 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
MSL3-217ENST00000494268 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
MSL3-217ENST00000494268 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
MSL3-217ENST00000494268 MT2AP02795 61 aa1.62□□□□□ -2.15
MSL3-217ENST00000494268 MT1FP04733 61 aa1.62□□□□□ -2.15
MSL3-217ENST00000494268 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
MSL3-217ENST00000494268 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
MSL3-217ENST00000494268 USH2AO75445 5202 aa1.53□□□□□ -2.16
MSL3-217ENST00000494268 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
MSL3-217ENST00000494268 MT1BP07438 61 aa1.49□□□□□ -2.17
MSL3-217ENST00000494268 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
MSL3-217ENST00000494268 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
MSL3-217ENST00000494268 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
MSL3-217ENST00000494268 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
MSL3-217ENST00000494268 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
MSL3-217ENST00000494268 MT1XP80297 61 aa1.41□□□□□ -2.18
MSL3-217ENST00000494268 KMT2DO14686 5537 aa1.37□□□□□ -2.19
MSL3-217ENST00000494268 NEBP20929 6669 aa1.36□□□□□ -2.19
MSL3-217ENST00000494268 PRM1P04553 51 aa1.34□□□□□ -2.19
MSL3-217ENST00000494268 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
MSL3-217ENST00000494268 SPRR2FQ96RM1 72 aa1.32□□□□□ -2.2
MSL3-217ENST00000494268 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
MSL3-217ENST00000494268 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
MSL3-217ENST00000494268 SPRR2EP22531 72 aa1.29□□□□□ -2.2
MSL3-217ENST00000494268 SPRR2BP35325 72 aa1.29□□□□□ -2.2
MSL3-217ENST00000494268 SPRR2AP35326 72 aa1.29□□□□□ -2.2
MSL3-217ENST00000494268 MT1AP04731 61 aa1.27□□□□□ -2.21
MSL3-217ENST00000494268 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
MSL3-217ENST00000494268 MT1EP04732 61 aa1.24□□□□□ -2.21
MSL3-217ENST00000494268 SPRR2DP22532 72 aa1.24□□□□□ -2.21
MSL3-217ENST00000494268 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
MSL3-217ENST00000494268 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
MSL3-217ENST00000494268 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
MSL3-217ENST00000494268 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
MSL3-217ENST00000494268 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
MSL3-217ENST00000494268 MT1LQ93083 61 aa1.19□□□□□ -2.22
MSL3-217ENST00000494268 MT1MQ8N339 61 aa1.17□□□□□ -2.22
MSL3-217ENST00000494268 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
MSL3-217ENST00000494268 MT1GP13640 62 aa1.16□□□□□ -2.22
MSL3-217ENST00000494268 MT4P47944 62 aa1.13□□□□□ -2.23
MSL3-217ENST00000494268 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
MSL3-217ENST00000494268 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
MSL3-217ENST00000494268 GPR98Q8WXG9 6306 aa1.04□□□□□ -2.24
MSL3-217ENST00000494268 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
MSL3-217ENST00000494268 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
MSL3-217ENST00000494268 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
MSL3-217ENST00000494268 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
MSL3-217ENST00000494268 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
MSL3-217ENST00000494268 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
MSL3-217ENST00000494268 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 125.7 ms