RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 MT2AP02795 61 aa3.52□□□□□ -1.85
KPNA1-209ENST00000493510 C20orf166-AS1Q96NR2 134 aa3.52□□□□□ -1.85
KPNA1-209ENST00000493510 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
KPNA1-209ENST00000493510 RPL37P61927 97 aaKnown RBP3.49□□□□□ -1.85
KPNA1-209ENST00000493510 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
KPNA1-209ENST00000493510 MT1FP04733 61 aa3.48□□□□□ -1.85
KPNA1-209ENST00000493510 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
KPNA1-209ENST00000493510 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
KPNA1-209ENST00000493510 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
KPNA1-209ENST00000493510 SPRR2DP22532 72 aa3.44□□□□□ -1.86
KPNA1-209ENST00000493510 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
KPNA1-209ENST00000493510 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
KPNA1-209ENST00000493510 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
KPNA1-209ENST00000493510 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
KPNA1-209ENST00000493510 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
KPNA1-209ENST00000493510 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
KPNA1-209ENST00000493510 S4R3F8 94 aa3.36□□□□□ -1.87
KPNA1-209ENST00000493510 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
KPNA1-209ENST00000493510 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
KPNA1-209ENST00000493510 C9orf92A6NGG3 77 aa3.32□□□□□ -1.88
KPNA1-209ENST00000493510 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
KPNA1-209ENST00000493510 A0A0D9SG42 100 aa3.3□□□□□ -1.88
KPNA1-209ENST00000493510 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
KPNA1-209ENST00000493510 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
KPNA1-209ENST00000493510 M0QZ58 72 aa3.27□□□□□ -1.89
KPNA1-209ENST00000493510 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
KPNA1-209ENST00000493510 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
KPNA1-209ENST00000493510 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
KPNA1-209ENST00000493510 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
KPNA1-209ENST00000493510 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
KPNA1-209ENST00000493510 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
KPNA1-209ENST00000493510 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
KPNA1-209ENST00000493510 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
KPNA1-209ENST00000493510 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
KPNA1-209ENST00000493510 MT4P47944 62 aa3.07□□□□□ -1.92
KPNA1-209ENST00000493510 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
KPNA1-209ENST00000493510 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
KPNA1-209ENST00000493510 R4GN34 69 aa3.05□□□□□ -1.92
KPNA1-209ENST00000493510 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
KPNA1-209ENST00000493510 MT1BP07438 61 aa2.93□□□□□ -1.94
KPNA1-209ENST00000493510 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
KPNA1-209ENST00000493510 TNP1P09430 55 aa2.9□□□□□ -1.95
KPNA1-209ENST00000493510 INE1O15225 51 aa2.89□□□□□ -1.95
KPNA1-209ENST00000493510 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
KPNA1-209ENST00000493510 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
KPNA1-209ENST00000493510 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
KPNA1-209ENST00000493510 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
KPNA1-209ENST00000493510 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
KPNA1-209ENST00000493510 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
KPNA1-209ENST00000493510 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
KPNA1-209ENST00000493510 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
KPNA1-209ENST00000493510 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
KPNA1-209ENST00000493510 KRTAP12-3P60328 96 aa2.54□□□□□ -2
KPNA1-209ENST00000493510 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
KPNA1-209ENST00000493510 MT1XP80297 61 aa2.52□□□□□ -2.01
KPNA1-209ENST00000493510 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
KPNA1-209ENST00000493510 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
KPNA1-209ENST00000493510 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
KPNA1-209ENST00000493510 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
KPNA1-209ENST00000493510 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
KPNA1-209ENST00000493510 MT1GP13640 62 aa2.35□□□□□ -2.03
KPNA1-209ENST00000493510 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
KPNA1-209ENST00000493510 MT1EP04732 61 aa2.31□□□□□ -2.04
KPNA1-209ENST00000493510 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
KPNA1-209ENST00000493510 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
KPNA1-209ENST00000493510 MT1MQ8N339 61 aa2.26□□□□□ -2.05
KPNA1-209ENST00000493510 MT1LQ93083 61 aa2.17□□□□□ -2.06
KPNA1-209ENST00000493510 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
KPNA1-209ENST00000493510 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
KPNA1-209ENST00000493510 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
KPNA1-209ENST00000493510 MT1AP04731 61 aa2.01□□□□□ -2.09
KPNA1-209ENST00000493510 PRM1P04553 51 aa1.88□□□□□ -2.11
KPNA1-209ENST00000493510 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
KPNA1-209ENST00000493510 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
KPNA1-209ENST00000493510 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
KPNA1-209ENST00000493510 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
KPNA1-209ENST00000493510 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
KPNA1-209ENST00000493510 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 155.8 ms