RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 SPRR2AP35326 72 aa5.96□□□□□ -1.46
COPS3-210ENST00000492672 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
COPS3-210ENST00000492672 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
COPS3-210ENST00000492672 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
COPS3-210ENST00000492672 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
COPS3-210ENST00000492672 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
COPS3-210ENST00000492672 MT1EP04732 61 aa5.88□□□□□ -1.47
COPS3-210ENST00000492672 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
COPS3-210ENST00000492672 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
COPS3-210ENST00000492672 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
COPS3-210ENST00000492672 ROMO1P60602 79 aa5.75□□□□□ -1.49
COPS3-210ENST00000492672 SPRR2DP22532 72 aa5.74□□□□□ -1.49
COPS3-210ENST00000492672 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
COPS3-210ENST00000492672 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
COPS3-210ENST00000492672 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
COPS3-210ENST00000492672 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
COPS3-210ENST00000492672 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
COPS3-210ENST00000492672 MT1LQ93083 61 aa5.68□□□□□ -1.5
COPS3-210ENST00000492672 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
COPS3-210ENST00000492672 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
COPS3-210ENST00000492672 MT1GP13640 62 aa5.61□□□□□ -1.51
COPS3-210ENST00000492672 MT1MQ8N339 61 aa5.57□□□□□ -1.52
COPS3-210ENST00000492672 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
COPS3-210ENST00000492672 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
COPS3-210ENST00000492672 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
COPS3-210ENST00000492672 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
COPS3-210ENST00000492672 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
COPS3-210ENST00000492672 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
COPS3-210ENST00000492672 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
COPS3-210ENST00000492672 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
COPS3-210ENST00000492672 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
COPS3-210ENST00000492672 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
COPS3-210ENST00000492672 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
COPS3-210ENST00000492672 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
COPS3-210ENST00000492672 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
COPS3-210ENST00000492672 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
COPS3-210ENST00000492672 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
COPS3-210ENST00000492672 MT4P47944 62 aa5.04□□□□□ -1.6
COPS3-210ENST00000492672 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
COPS3-210ENST00000492672 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
COPS3-210ENST00000492672 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
COPS3-210ENST00000492672 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
COPS3-210ENST00000492672 MT1AP04731 61 aa4.81□□□□□ -1.64
COPS3-210ENST00000492672 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
COPS3-210ENST00000492672 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
COPS3-210ENST00000492672 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
COPS3-210ENST00000492672 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
COPS3-210ENST00000492672 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
COPS3-210ENST00000492672 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
COPS3-210ENST00000492672 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
COPS3-210ENST00000492672 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
COPS3-210ENST00000492672 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
COPS3-210ENST00000492672 MT3P25713 68 aa4.36□□□□□ -1.71
COPS3-210ENST00000492672 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
COPS3-210ENST00000492672 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
COPS3-210ENST00000492672 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
COPS3-210ENST00000492672 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
COPS3-210ENST00000492672 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
COPS3-210ENST00000492672 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
COPS3-210ENST00000492672 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
COPS3-210ENST00000492672 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
COPS3-210ENST00000492672 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
COPS3-210ENST00000492672 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
COPS3-210ENST00000492672 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
COPS3-210ENST00000492672 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
COPS3-210ENST00000492672 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
COPS3-210ENST00000492672 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
COPS3-210ENST00000492672 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
COPS3-210ENST00000492672 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
COPS3-210ENST00000492672 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
COPS3-210ENST00000492672 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
COPS3-210ENST00000492672 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
COPS3-210ENST00000492672 PRM1P04553 51 aa3.01□□□□□ -1.93
COPS3-210ENST00000492672 INE1O15225 51 aa2.98□□□□□ -1.93
COPS3-210ENST00000492672 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
COPS3-210ENST00000492672 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
COPS3-210ENST00000492672 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
COPS3-210ENST00000492672 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms